RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 M0R2C6 588 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 GNAT1P11488 350 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 C4orf50Q6ZRC1 276 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 PCGF5Q86SE9 256 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 QTRT2Q9H974 415 aaKnown RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 BSDC1Q9NW68 430 aaPredicted RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 TTI1O43156 1089 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 KCNQ3O43525 872 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 COG7P83436 770 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 SLMAPQ14BN4 828 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 ARL13BQ3SXY8 428 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 HSP90AA5PQ58FG0 334 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 NLRP7Q8WX94 980 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 LRRC4Q9HBW1 653 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 PNMA6FA0A0J9YX94 578 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 POC1B-GALNT4F8VUJ3 575 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 IGSF3O75054 1194 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 CPP00450 1065 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 SERPINB2P05120 415 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 MSH2P43246 934 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 FOXP4Q8IVH2 680 aaPredicted RBP5.9□□□□□ -1.46
VPS13C-204ENST00000395898 SPICE1Q8N0Z3 855 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 DNAAF3Q8N9W5 541 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 TDRD7Q8NHU6 1098 aaKnown RBP5.9□□□□□ -1.46
VPS13C-204ENST00000395898 GBP5Q96PP8 586 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 CNOT10Q9H9A5 744 aaKnown RBP5.9□□□□□ -1.46
VPS13C-204ENST00000395898 ASAP1Q9ULH1 1129 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 OPHN1O60890 802 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 LRRN2O75325 713 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 PSAPP07602 524 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 LTKP29376 864 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 ADORA1P30542 326 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 RBL2Q08999 1139 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 JADE1Q6IE81 842 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 ELMSAN1Q6PJG2 1045 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 LINC00301Q8NCQ3 95 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 ZNF653Q96CK0 615 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 CCDC124Q96CT7 223 aaKnown RBP5.9□□□□□ -1.46
VPS13C-204ENST00000395898 HDAC11Q96DB2 347 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 KIAA1586Q9HCI6 787 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 TJP3O95049 919 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 SERPINB6P35237 376 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 ORC2Q13416 577 aaPredicted RBP5.9□□□□□ -1.46
VPS13C-204ENST00000395898 PROM2Q8N271 834 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 DRC3Q9H069 523 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 SLC38A10Q9HBR0 1119 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 CCDC151A5D8V7 595 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 SART1O43290 800 aaKnown RBP5.9□□□□□ -1.46
VPS13C-204ENST00000395898 GPC4O75487 556 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 DNAJC8O75937 253 aaPredicted RBP5.9□□□□□ -1.46
VPS13C-204ENST00000395898 PAMP19021 973 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 ATP1A2P50993 1020 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 IQCB1Q15051 598 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 ZNF827Q17R98 1081 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 SYDE2Q5VT97 1194 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 RFX6Q8HWS3 928 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 EFHD1Q9BUP0 239 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 DPH5Q9H2P9 285 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 ERBB3P21860 1342 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 MYO3BQ8WXR4 1341 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 PLEKHG2Q9H7P9 1386 aa5.9□□□□□ -1.46
VPS13C-204ENST00000395898 NPR1P16066 1061 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 XPAP23025 273 aaPredicted RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 ADCK5Q3MIX3 580 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 PDXDC2PQ6P474 469 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 WHAMMQ8TF30 809 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 GDAP1L1Q96MZ0 367 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 NHEJ1Q9H9Q4 299 aaPredicted RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 RPF1Q9H9Y2 349 aaKnown RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 IREB2P48200 963 aaKnown RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 SESTD1Q86VW0 696 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 RHOT2Q8IXI1 618 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 PI4K2BQ8TCG2 481 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 TCP11Q8WWU5 503 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 MXD3Q9BW11 206 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 COA1Q9GZY4 146 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 CAPN7Q9Y6W3 813 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 ERVK-7P63135 1459 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 SAT1P21673 171 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 AP3B2Q13367 1082 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 CUL1Q13616 776 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 CUL4AQ13619 759 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 ENOX1Q8TC92 643 aaKnown RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 PANX2Q96RD6 677 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 RCOR1Q9UKL0 485 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 NPHP4O75161 1426 aaPredicted RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 TMTC4Q5T4D3 741 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 KIAA1841Q6NSI8 718 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 ADAT2Q7Z6V5 191 aaKnown RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 C17orf53Q8N3J3 647 aaPredicted RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 PRPF38AQ8NAV1 312 aaKnown RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 NSUN7Q8NE18 718 aaKnown RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 PDZD8Q8NEN9 1154 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 DDX27Q96GQ7 796 aaKnown RBP5.9□□□□□ -1.47
VPS13C-204ENST00000395898 EMILIN3Q9NT22 766 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 LRFN2Q9ULH4 789 aa5.9□□□□□ -1.47
VPS13C-204ENST00000395898 SH2B2O14492 632 aaPredicted RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 ECEL1O95672 775 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 STX1BP61266 288 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 YWHAGP61981 247 aaKnown RBP eCLIP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms