RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DDX39AO00148 427 aaKnown RBP22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 SLC26A4O43511 780 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 CHMP2AO43633 222 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 EDNRBP24530 442 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 MDM2Q00987 491 aaPredicted RBP22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 NAALADL2Q58DX5 795 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 GAS2L3Q86XJ1 694 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 GRAMD1CQ8IYS0 662 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 CDHR1Q96JP9 859 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 CAPNS2Q96L46 248 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 PNMA5Q96PV4 448 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 FUCA2Q9BTY2 467 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 NT5C3AQ9H0P0 336 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 CUEDC2Q9H467 287 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 TBC1D22BQ9NU19 505 aa22.93■■□□□ 1.26
VCPKMT-202ENST00000395860 DOCK5Q9H7D0 1870 aa22.92■■□□□ 1.26
VCPKMT-202ENST00000395860 RGS20O76081 388 aa22.92■■□□□ 1.26
VCPKMT-202ENST00000395860 ADORA2AP29274 412 aa22.92■■□□□ 1.26
VCPKMT-202ENST00000395860 ITGB3BPQ13352 177 aaPredicted RBP22.92■■□□□ 1.26
VCPKMT-202ENST00000395860 PLEKHH3Q7Z736 793 aa22.92■■□□□ 1.26
VCPKMT-202ENST00000395860 FGD4Q96M96 766 aa22.92■■□□□ 1.26
VCPKMT-202ENST00000395860 UNC45AQ9H3U1 944 aa22.92■■□□□ 1.26
VCPKMT-202ENST00000395860 MCM3APO60318 1980 aa22.92■■□□□ 1.26
VCPKMT-202ENST00000395860 TYRO3Q06418 890 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 CRHR2Q13324 411 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 C17orf99Q6UX52 265 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 SH3RF1Q7Z6J0 888 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 STK17AQ9UEE5 414 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 EML1O00423 815 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 DHX15O43143 795 aaKnown RBP22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 AOC2O75106 756 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 ATP9AO75110 1047 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 PRR29P0C7W0 189 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 HYIQ5T013 277 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 STAMQ92783 540 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 MAGEF1Q9HAY2 307 aa22.91■■□□□ 1.26
VCPKMT-202ENST00000395860 ZNF236Q9UL36 1845 aa22.9■■□□□ 1.26
VCPKMT-202ENST00000395860 LOC102724159A0A0B4J2E5 919 aa22.9■■□□□ 1.26
VCPKMT-202ENST00000395860 MED24O75448 989 aa22.9■■□□□ 1.26
VCPKMT-202ENST00000395860 ALDH1A1P00352 501 aa22.9■■□□□ 1.26
VCPKMT-202ENST00000395860 SEMA3FQ13275 785 aa22.9■■□□□ 1.26
VCPKMT-202ENST00000395860 PWP2Q15269 919 aaKnown RBP22.9■■□□□ 1.26
VCPKMT-202ENST00000395860 TMEM119Q4V9L6 283 aa22.9■■□□□ 1.26
VCPKMT-202ENST00000395860 LRRC15Q8TF66 581 aa22.9■■□□□ 1.26
VCPKMT-202ENST00000395860 EIF2AK1Q9BQI3 630 aaKnown RBP22.9■■□□□ 1.26
VCPKMT-202ENST00000395860 TCEAL9Q9UHQ7 104 aa22.9■■□□□ 1.26
VCPKMT-202ENST00000395860 POTEB3A0JP26 581 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 GOLGA6L3A6NEY3 463 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 SPATA31C2B4DYI2 1134 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 CA12O43570 354 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 RPA1P27694 616 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 GRB14Q14449 540 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 ECM1Q16610 540 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 ZNF792Q3KQV3 632 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 POTEBQ6S5H4 581 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 B3GNT9Q6UX72 402 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 SEPT14Q6ZU15 432 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 CATSPER3Q86XQ3 398 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 TUBE1Q9UJT0 475 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 KIAA1024Q9UPX6 916 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 PCDHA5Q9Y5H7 936 aa22.89■■□□□ 1.26
VCPKMT-202ENST00000395860 ASB14A6NK59 587 aa22.89■■□□□ 1.25
VCPKMT-202ENST00000395860 COBLO75128 1261 aa22.89■■□□□ 1.25
VCPKMT-202ENST00000395860 ICAM3P32942 547 aa22.89■■□□□ 1.25
VCPKMT-202ENST00000395860 MIER3Q7Z3K6 550 aa22.89■■□□□ 1.25
VCPKMT-202ENST00000395860 DPP9Q86TI2 863 aa22.89■■□□□ 1.25
VCPKMT-202ENST00000395860 REM2Q8IYK8 340 aaPredicted RBP22.89■■□□□ 1.25
VCPKMT-202ENST00000395860 SMARCE1Q969G3 411 aa22.89■■□□□ 1.25
VCPKMT-202ENST00000395860 POLR3CQ9BUI4 534 aaPredicted RBP22.89■■□□□ 1.25
VCPKMT-202ENST00000395860 BLOC1S4Q9NUP1 217 aa22.89■■□□□ 1.25
VCPKMT-202ENST00000395860 MGAMO43451 1857 aa22.88■■□□□ 1.25
VCPKMT-202ENST00000395860 GTPBP6O43824 516 aaPredicted RBP22.88■■□□□ 1.25
VCPKMT-202ENST00000395860 SMC2O95347 1197 aa22.88■■□□□ 1.25
VCPKMT-202ENST00000395860 EPHA7Q15375 998 aa22.88■■□□□ 1.25
VCPKMT-202ENST00000395860 LARP4BQ92615 738 aaKnown RBP22.88■■□□□ 1.25
VCPKMT-202ENST00000395860 RAD54LQ92698 747 aa22.88■■□□□ 1.25
VCPKMT-202ENST00000395860 MTRQ99707 1265 aa22.88■■□□□ 1.25
VCPKMT-202ENST00000395860 KBTBD4Q9NVX7 518 aa22.88■■□□□ 1.25
VCPKMT-202ENST00000395860 SLC15A5A6NIM6 579 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 BIN1O00499 593 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 ECM2O94769 699 aaPredicted RBP22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 SPATA31C1P0DKV0 1188 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 KCNA2P16389 499 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 KRT76Q01546 638 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 CYP4A11Q02928 519 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 STX1AQ16623 288 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 EEPD1Q7L9B9 569 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 MORC4Q8TE76 937 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 TUFT1Q9NNX1 390 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 SAMM50Q9Y512 469 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 NFASCO94856 1347 aa22.87■■□□□ 1.25
VCPKMT-202ENST00000395860 POTEFA5A3E0 1075 aa22.86■■□□□ 1.25
VCPKMT-202ENST00000395860 CASP1P29466 404 aa22.86■■□□□ 1.25
VCPKMT-202ENST00000395860 AMPD3Q01432 767 aa22.86■■□□□ 1.25
VCPKMT-202ENST00000395860 DPYDQ12882 1025 aa22.86■■□□□ 1.25
VCPKMT-202ENST00000395860 DHX8Q14562 1220 aaKnown RBP22.86■■□□□ 1.25
VCPKMT-202ENST00000395860 POTEGQ6S5H5 508 aa22.86■■□□□ 1.25
VCPKMT-202ENST00000395860 SV2BQ7L1I2 683 aa22.86■■□□□ 1.25
VCPKMT-202ENST00000395860 KCNK18Q7Z418 384 aa22.86■■□□□ 1.25
VCPKMT-202ENST00000395860 DYDC2Q96IM9 177 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms