RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 CCDC152Q4G0S7 254 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 AIDAQ96BJ3 306 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 CYFIP2Q96F07 1278 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 EIF2AQ9BY44 585 aaKnown RBP9.74□□□□□ -0.85
MSH5-205ENST00000395853 LSG1Q9H089 658 aaKnown RBP9.74□□□□□ -0.85
MSH5-205ENST00000395853 ZBTB3Q9H5J0 574 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 DKK3Q9UBP4 350 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 ZNF180Q9UJW8 692 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 ZNF148Q9UQR1 794 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 SCN7AQ01118 1682 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 CARMIL3Q8ND23 1372 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 HSPA8P11142 646 aaKnown RBP9.74□□□□□ -0.85
MSH5-205ENST00000395853 SP100P23497 879 aaPredicted RBP9.74□□□□□ -0.85
MSH5-205ENST00000395853 GSTT1P30711 240 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 PTPN12Q05209 780 aaKnown RBP9.74□□□□□ -0.85
MSH5-205ENST00000395853 KIF5AQ12840 1032 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 C3orf67Q6ZVT6 689 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 GABPB2Q8TAK5 448 aaPredicted RBP9.74□□□□□ -0.85
MSH5-205ENST00000395853 SRPK1Q96SB4 655 aaKnown RBP9.74□□□□□ -0.85
MSH5-205ENST00000395853 SELENOOQ9BVL4 669 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 MRPL46Q9H2W6 279 aaKnown RBP9.74□□□□□ -0.85
MSH5-205ENST00000395853 CEP131Q9UPN4 1083 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 ATP6V0A2Q9Y487 856 aa9.74□□□□□ -0.85
MSH5-205ENST00000395853 MYPNQ86TC9 1320 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 FOXN1O15353 648 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 HNRNPRO43390 633 aaKnown RBP9.73□□□□□ -0.85
MSH5-205ENST00000395853 ALADP13716 330 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 MTTPP55157 894 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 SH3BGRP55822 239 aaPredicted RBP9.73□□□□□ -0.85
MSH5-205ENST00000395853 GRAMD4Q6IC98 578 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 TMEM154Q6P9G4 183 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 NEK10Q6ZWH5 1172 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 KRI1Q8N9T8 703 aaKnown RBP9.73□□□□□ -0.85
MSH5-205ENST00000395853 NOA1Q8NC60 698 aaKnown RBP9.73□□□□□ -0.85
MSH5-205ENST00000395853 GPATCH3Q96I76 525 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 SPATA32Q96LK8 384 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 NDST4Q9H3R1 872 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 TTLL3Q9Y4R7 772 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 GSTA2P09210 222 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 ATP2A2P16615 1042 aaKnown RBP9.73□□□□□ -0.85
MSH5-205ENST00000395853 CCT6AP40227 531 aaKnown RBP9.73□□□□□ -0.85
MSH5-205ENST00000395853 ATP1A2P50993 1020 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 SEC24CP53992 1094 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 ITIH3Q06033 890 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 RABL6Q3YEC7 729 aaPredicted RBP9.73□□□□□ -0.85
MSH5-205ENST00000395853 SLC2A7Q6PXP3 512 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 CCDC63Q8NA47 563 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 GDAP1L1Q96MZ0 367 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 BOLA2Q9H3K6 86 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 COPRSQ9NQ92 184 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 RMND1Q9NWS8 449 aa9.73□□□□□ -0.85
MSH5-205ENST00000395853 hCG_2014768A0A024R1R8 64 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 UNCXA6NJT0 531 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 TBC1D12O60347 775 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 MGEA5O60502 916 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 ATP2C2O75185 946 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 TOP1P11387 765 aaKnown RBP9.72□□□□□ -0.85
MSH5-205ENST00000395853 IL4RP24394 825 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 VARSP26640 1264 aaKnown RBP9.72□□□□□ -0.85
MSH5-205ENST00000395853 CSE1LP55060 971 aaKnown RBP9.72□□□□□ -0.85
MSH5-205ENST00000395853 FOXO4P98177 505 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 PTH1RQ03431 593 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 TFCP2Q12800 502 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 ZNF268Q14587 947 aaPredicted RBP9.72□□□□□ -0.85
MSH5-205ENST00000395853 SEPT2Q15019 361 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
MSH5-205ENST00000395853 CCSAPQ6IQ19 270 aaPredicted RBP9.72□□□□□ -0.85
MSH5-205ENST00000395853 LMBR1LQ6UX01 489 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 BPHLQ86WA6 291 aaPredicted RBP9.72□□□□□ -0.85
MSH5-205ENST00000395853 RASEFQ8IZ41 740 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 GIMAP1Q8WWP7 306 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 IFT43Q96FT9 208 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 RPS6KC1Q96S38 1066 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 PANK4Q9NVE7 773 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 ZMAT5Q9UDW3 170 aaKnown RBP9.72□□□□□ -0.85
MSH5-205ENST00000395853 FAM184BQ9ULE4 1060 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 CHMP2BQ9UQN3 213 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 TMEM88BA6NKF7 163 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 TMEM110-MUSTN1A8MSY1 372 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 E7EVH7 732 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 RGL2O15211 777 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 BBOX1O75936 387 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 SCG2P13521 617 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 PCK1P35558 622 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 IL6STP40189 918 aaPredicted RBP9.72□□□□□ -0.85
MSH5-205ENST00000395853 PDE6CP51160 858 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 ZNF132P52740 706 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 GUCY1A3Q02108 690 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 ARHGEF6Q15052 776 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 PRR5LQ6MZQ0 368 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 KDM7AQ6ZMT4 941 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 RPGRIP1Q96KN7 1286 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 NEK1Q96PY6 1258 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 SMC6Q96SB8 1091 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 CARD9Q9H257 536 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 WBP1LQ9NX94 342 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 ZNF330Q9Y3S2 320 aaPredicted RBP9.72□□□□□ -0.85
MSH5-205ENST00000395853 SLC4A7Q9Y6M7 1214 aa9.72□□□□□ -0.85
MSH5-205ENST00000395853 COL11A2P13942 1736 aaPredicted RBP9.72□□□□□ -0.85
MSH5-205ENST00000395853 CTAGE9A4FU28 777 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms