RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 KRT79Q5XKE5 535 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 IQUBQ8NA54 791 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 PNMA5Q96PV4 448 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 GZF1Q9H116 711 aaPredicted RBP17■□□□□ 0.31
PTPN20-206ENST00000395722 UNC45AQ9H3U1 944 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 CCDC39Q9UFE4 941 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 SERTAD1Q9UHV2 236 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 DOCK3Q8IZD9 2030 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 NFASCO94856 1347 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 MCM3APO60318 1980 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 EML1O00423 815 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 LETM1O95202 739 aaPredicted RBP17■□□□□ 0.31
PTPN20-206ENST00000395722 MAP2K5Q13163 448 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 PDXDC2PQ6P474 469 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 SH3RF1Q7Z6J0 888 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 SNX29Q8TEQ0 813 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 LRRC15Q8TF66 581 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 DHX58Q96C10 678 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 TNMDQ9H2S6 317 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 GJD2Q9UKL4 321 aa17■□□□□ 0.31
PTPN20-206ENST00000395722 PLCG1P19174 1290 aa16.99■□□□□ 0.31
PTPN20-206ENST00000395722 CTGFP29279 349 aa16.99■□□□□ 0.31
PTPN20-206ENST00000395722 MDM2Q00987 491 aaPredicted RBP16.99■□□□□ 0.31
PTPN20-206ENST00000395722 CAMK4Q16566 473 aa16.99■□□□□ 0.31
PTPN20-206ENST00000395722 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
PTPN20-206ENST00000395722 ARMCX2Q7L311 632 aa16.99■□□□□ 0.31
PTPN20-206ENST00000395722 DPP9Q86TI2 863 aa16.99■□□□□ 0.31
PTPN20-206ENST00000395722 MSL3Q8N5Y2 521 aaKnown RBP16.99■□□□□ 0.31
PTPN20-206ENST00000395722 CALML4Q96GE6 196 aa16.99■□□□□ 0.31
PTPN20-206ENST00000395722 MAML3Q96JK9 1138 aa16.99■□□□□ 0.31
PTPN20-206ENST00000395722 SENP7Q9BQF6 1050 aa16.99■□□□□ 0.31
PTPN20-206ENST00000395722 RNF186Q9NXI6 227 aa16.99■□□□□ 0.31
PTPN20-206ENST00000395722 TGFB3P10600 412 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 ZNF445P59923 1031 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 RRAGBQ5VZM2 374 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 HAUS3Q68CZ6 603 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 ERMNQ8TAM6 284 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 NPLOC4Q8TAT6 608 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 HSD17B14Q9BPX1 270 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 SDF4Q9BRK5 362 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 POLR3CQ9BUI4 534 aaPredicted RBP16.98■□□□□ 0.31
PTPN20-206ENST00000395722 CUEDC2Q9H467 287 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 SLC5A4Q9NY91 659 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 PKD2L1Q9P0L9 805 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 KDM3AQ9Y4C1 1321 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 IGHA2P01877 340 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 SPATA31C1P0DKV0 1188 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 RPA1P27694 616 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 CCT6AP40227 531 aaKnown RBP16.98■□□□□ 0.31
PTPN20-206ENST00000395722 STAT6P42226 847 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 LACTBP83111 547 aaPredicted RBP16.98■□□□□ 0.31
PTPN20-206ENST00000395722 EPHA7Q15375 998 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 ECM1Q16610 540 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 SOCS4Q8WXH5 440 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 KATNBL1Q9H079 304 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 SYNGAP1Q96PV0 1343 aa16.98■□□□□ 0.31
PTPN20-206ENST00000395722 MED24O75448 989 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 TBC1D8O95759 1140 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 KRT76Q01546 638 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 SP2Q02086 613 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 ZNF746Q6NUN9 644 aaPredicted RBP16.97■□□□□ 0.31
PTPN20-206ENST00000395722 KCNV1Q6PIU1 500 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 SEPT14Q6ZU15 432 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 KCTD17Q8N5Z5 321 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 EIF2AK1Q9BQI3 630 aaKnown RBP16.97■□□□□ 0.31
PTPN20-206ENST00000395722 MAGEF1Q9HAY2 307 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 VTA1Q9NP79 307 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 BLOC1S4Q9NUP1 217 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 STK17AQ9UEE5 414 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 SYCE3A1L190 88 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 TNPO2O14787 897 aaKnown RBP16.97■□□□□ 0.31
PTPN20-206ENST00000395722 SNAI1O95863 264 aaPredicted RBP16.97■□□□□ 0.31
PTPN20-206ENST00000395722 CCNE2O96020 404 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 MUTP22033 750 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 CCDC62Q6P9F0 684 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 CATSPER3Q86XQ3 398 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 CEP57L1Q8IYX8 460 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 RDM1Q8NG50 284 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 PAGE5Q96GU1 130 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 MTRQ99707 1265 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 TINF2Q9BSI4 451 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 NT5C3AQ9H0P0 336 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 TUFT1Q9NNX1 390 aa16.97■□□□□ 0.31
PTPN20-206ENST00000395722 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.97■□□□□ 0.31
PTPN20-206ENST00000395722 ZSWIM8A7E2V4 1837 aa16.96■□□□□ 0.31
PTPN20-206ENST00000395722 RBM47A0AV96 593 aaKnown RBP16.96■□□□□ 0.31
PTPN20-206ENST00000395722 DDX39AO00148 427 aaKnown RBP16.96■□□□□ 0.31
PTPN20-206ENST00000395722 UBA1P22314 1058 aaKnown RBP16.96■□□□□ 0.31
PTPN20-206ENST00000395722 RGS2P41220 211 aa16.96■□□□□ 0.31
PTPN20-206ENST00000395722 JAK3P52333 1124 aa16.96■□□□□ 0.31
PTPN20-206ENST00000395722 FCGRTP55899 365 aa16.96■□□□□ 0.31
PTPN20-206ENST00000395722 RASSF8Q8NHQ8 419 aa16.96■□□□□ 0.31
PTPN20-206ENST00000395722 NEK9Q8TD19 979 aa16.96■□□□□ 0.31
PTPN20-206ENST00000395722 TRIM47Q96LD4 638 aa16.96■□□□□ 0.31
PTPN20-206ENST00000395722 KBTBD4Q9NVX7 518 aa16.96■□□□□ 0.31
PTPN20-206ENST00000395722 POTEB3A0JP26 581 aa16.95■□□□□ 0.3
PTPN20-206ENST00000395722 FOXN1O15353 648 aa16.95■□□□□ 0.3
PTPN20-206ENST00000395722 CHMP2AO43633 222 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms