RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 FAM160B2Q86V87 743 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 HOMER1Q86YM7 354 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 ANKRD13AQ8IZ07 590 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 RTEL1Q9NZ71 1219 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 PCDHA4Q9UN74 947 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 TCHHQ07283 1943 aa13.04□□□□□ -0.32
RTN1-203ENST00000395090 ZYXQ15942 572 aaKnown RBP13.04□□□□□ -0.32
RTN1-203ENST00000395090 QRICH1Q2TAL8 776 aa13.04□□□□□ -0.32
RTN1-203ENST00000395090 GNASQ5JWF2 1037 aa13.04□□□□□ -0.32
RTN1-203ENST00000395090 BLIDQ8IZY5 108 aa13.04□□□□□ -0.32
RTN1-203ENST00000395090 GTF3C2Q8WUA4 911 aaPredicted RBP13.04□□□□□ -0.32
RTN1-203ENST00000395090 BRMS1Q9HCU9 246 aa13.04□□□□□ -0.32
RTN1-203ENST00000395090 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
RTN1-203ENST00000395090 ZNF232Q9UNY5 417 aa13.04□□□□□ -0.32
RTN1-203ENST00000395090 CSADQ9Y600 493 aa13.04□□□□□ -0.32
RTN1-203ENST00000395090 ELP1O95163 1332 aa13.04□□□□□ -0.32
RTN1-203ENST00000395090 PAPPA2Q9BXP8 1791 aa13.04□□□□□ -0.32
RTN1-203ENST00000395090 SMCO2A6NFE2 343 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 GNA11P29992 359 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 NOS2P35228 1153 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 TOB1P50616 345 aaPredicted RBP13.03□□□□□ -0.32
RTN1-203ENST00000395090 NAPAP54920 295 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 PPATQ06203 517 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
RTN1-203ENST00000395090 NAA30Q147X3 362 aaPredicted RBP13.03□□□□□ -0.32
RTN1-203ENST00000395090 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
RTN1-203ENST00000395090 ARMC9Q7Z3E5 817 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 ERO1BQ86YB8 467 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 CRIPAKQ8N1N5 446 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 PRPF38AQ8NAV1 312 aaKnown RBP13.03□□□□□ -0.32
RTN1-203ENST00000395090 ZDHHC1Q8WTX9 485 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 LEO1Q8WVC0 666 aaPredicted RBP13.03□□□□□ -0.32
RTN1-203ENST00000395090 USP28Q96RU2 1077 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 RANBP17Q9H2T7 1088 aaKnown RBP13.03□□□□□ -0.32
RTN1-203ENST00000395090 EGFL7Q9UHF1 273 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 PHIPQ8WWQ0 1821 aa13.03□□□□□ -0.32
RTN1-203ENST00000395090 TRIM75PA6NK02 468 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 EML1O00423 815 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 TRAF5O00463 557 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 ADAMTS3O15072 1205 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 VCAM1P19320 739 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 NCLP19338 710 aaKnown RBP13.02□□□□□ -0.32
RTN1-203ENST00000395090 NASPP49321 788 aaPredicted RBP13.02□□□□□ -0.32
RTN1-203ENST00000395090 RILPL1Q5EBL4 403 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 MOB2Q70IA6 237 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 COA7Q96BR5 231 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 AMNQ9BXJ7 453 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 C6orf50Q9HD87 102 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 PCDHA1Q9Y5I3 950 aa13.02□□□□□ -0.32
RTN1-203ENST00000395090 SOWAHDA6NJG2 315 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 CXCL11O14625 94 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 FKBP1BP68106 108 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 TRAF1Q13077 416 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
RTN1-203ENST00000395090 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
RTN1-203ENST00000395090 EARS2Q5JPH6 523 aaKnown RBP13.02□□□□□ -0.33
RTN1-203ENST00000395090 TEX2Q8IWB9 1127 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 RNF217Q8TC41 542 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 BICD2Q8TD16 824 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 CLMNQ96JQ2 1002 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 SPATA32Q96LK8 384 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 RIC8AQ9NPQ8 531 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 FBXO28Q9NVF7 368 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
RTN1-203ENST00000395090 PCDHA6Q9UN73 950 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 PCDHA8Q9Y5H6 950 aa13.02□□□□□ -0.33
RTN1-203ENST00000395090 FIBPO43427 364 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 YEATS4O95619 227 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 TRAPPC10P48553 1259 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 HMGCS2P54868 508 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 DGKZQ13574 1117 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 SLC39A14Q15043 492 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 ANO1Q5XXA6 986 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 TRIM46Q7Z4K8 759 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 FBXO11Q86XK2 927 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 LINC00301Q8NCQ3 95 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 SLF1Q9BQI6 1058 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 FTOQ9C0B1 505 aaKnown RBP eCLIP13.01□□□□□ -0.33
RTN1-203ENST00000395090 GLT8D2Q9H1C3 349 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 RPAP3Q9H6T3 665 aaPredicted RBP13.01□□□□□ -0.33
RTN1-203ENST00000395090 KCNH4Q9UQ05 1017 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
RTN1-203ENST00000395090 TTLL8A6PVC2 850 aa13□□□□□ -0.33
RTN1-203ENST00000395090 MRPL12P52815 198 aaKnown RBP13□□□□□ -0.33
RTN1-203ENST00000395090 UBE2HP62256 183 aa13□□□□□ -0.33
RTN1-203ENST00000395090 FMR1Q06787 632 aaKnown RBP eCLIP13□□□□□ -0.33
RTN1-203ENST00000395090 ZNF211Q13398 564 aaPredicted RBP13□□□□□ -0.33
RTN1-203ENST00000395090 PTPAQ15257 358 aa13□□□□□ -0.33
RTN1-203ENST00000395090 SH3PXD2AQ5TCZ1 1133 aa13□□□□□ -0.33
RTN1-203ENST00000395090 KIFC2Q96AC6 838 aa13□□□□□ -0.33
RTN1-203ENST00000395090 PSTPIP2Q9H939 334 aa13□□□□□ -0.33
RTN1-203ENST00000395090 ELP3Q9H9T3 547 aa13□□□□□ -0.33
RTN1-203ENST00000395090 PPP1R9AQ9ULJ8 1098 aa13□□□□□ -0.33
RTN1-203ENST00000395090 ADAMTS5Q9UNA0 930 aa13□□□□□ -0.33
RTN1-203ENST00000395090 DNMT3AQ9Y6K1 912 aaPredicted RBP13□□□□□ -0.33
RTN1-203ENST00000395090 MORC2Q9Y6X9 1032 aaPredicted RBP13□□□□□ -0.33
RTN1-203ENST00000395090 A0A0G2JLL6 359 aaPredicted RBP12.99□□□□□ -0.33
RTN1-203ENST00000395090 SPATA31C2B4DYI2 1134 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 GADD45BO75293 160 aaPredicted RBP12.99□□□□□ -0.33
RTN1-203ENST00000395090 ADCY7P51828 1080 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms