RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 MMP1P03956 469 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 KRT1P04264 644 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 CD58P19256 250 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 ZNF658Q5TYW1 1059 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-203ENST00000394872 OR6B2Q6IFH4 312 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 ELMSAN1Q6PJG2 1045 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 SCARA5Q6ZMJ2 495 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 RNF207Q6ZRF8 634 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 ATP6V1E2Q96A05 226 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 PARVGQ9HBI0 331 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 CASP2P42575 452 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 CLNS1AP54105 237 aaKnown RBP11.27□□□□□ -0.61
COL4A6-203ENST00000394872 IRX4P78413 519 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 SNX1Q13596 522 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 MYLK4Q86YV6 388 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-203ENST00000394872 KCTD6Q8NC69 237 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 HEXIM2Q96MH2 286 aaKnown RBP11.27□□□□□ -0.61
COL4A6-203ENST00000394872 TTC1Q99614 292 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 PPME1Q9Y570 386 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 MCF2LO15068 1137 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 CASP14P31944 242 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 DYNLT1P63172 113 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 IQCB1Q15051 598 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 DNAJC24Q6P3W2 148 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 GCNT4Q9P109 453 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 SLC8A2Q9UPR5 921 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL4A6-203ENST00000394872 KIF1BO60333 1816 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 FOXP4Q8IVH2 680 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-203ENST00000394872 LRRC8AQ8IWT6 810 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 DNAAF3Q8N9W5 541 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 FAM49AQ9H0Q0 323 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-203ENST00000394872 CPP00450 1065 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 CCDC38Q502W7 563 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 MAGOHBQ96A72 148 aaKnown RBP11.26□□□□□ -0.61
COL4A6-203ENST00000394872 PLA2G4BP0C869 781 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 SURF1Q15526 300 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 FAM114A2Q9NRY5 505 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 CPSF2Q9P2I0 782 aaKnown RBP11.26□□□□□ -0.61
COL4A6-203ENST00000394872 ERBB3P21860 1342 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 A0A1W2PQ27 194 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 A0A1W2PQ64 194 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 A0A1W2PQD8 194 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 ATP1A2P50993 1020 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 CTTNQ14247 550 aaKnown RBP11.26□□□□□ -0.61
COL4A6-203ENST00000394872 RC3H1Q5TC82 1133 aaKnown RBP11.26□□□□□ -0.61
COL4A6-203ENST00000394872 NSUN7Q8NE18 718 aaKnown RBP11.26□□□□□ -0.61
COL4A6-203ENST00000394872 FTOQ9C0B1 505 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL4A6-203ENST00000394872 FNDC3AQ9Y2H6 1198 aaKnown RBP11.26□□□□□ -0.61
COL4A6-203ENST00000394872 ARHGEF5Q12774 1597 aa11.26□□□□□ -0.61
COL4A6-203ENST00000394872 GFPT2O94808 682 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 MAN2A1Q16706 1144 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 PPP1R2P3Q6NXS1 205 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 DARS2Q6PI48 645 aaKnown RBP11.25□□□□□ -0.61
COL4A6-203ENST00000394872 GANCQ8TET4 914 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 VCX3AQ9NNX9 186 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 ROBO2Q9HCK4 1378 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 PRPF3O43395 683 aaKnown RBP11.25□□□□□ -0.61
COL4A6-203ENST00000394872 EEF1GP26641 437 aaKnown RBP11.25□□□□□ -0.61
COL4A6-203ENST00000394872 CRKP46108 304 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 THOC5Q13769 683 aaKnown RBP11.25□□□□□ -0.61
COL4A6-203ENST00000394872 DBN1Q16643 649 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 ARHGEF18Q6ZSZ5 1173 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 LRRC8CQ8TDW0 803 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-203ENST00000394872 OSBP2Q969R2 916 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.25□□□□□ -0.61
COL4A6-203ENST00000394872 HAUS8Q9BT25 410 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 MSTO1Q9BUK6 570 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 PIH1D3Q9NQM4 214 aaKnown RBP11.25□□□□□ -0.61
COL4A6-203ENST00000394872 ZSWIM5Q9P217 1185 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 BAIAP2L1Q9UHR4 511 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 PCDHA5Q9Y5H7 936 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 TMEM179Q6ZVK1 233 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 ARMCX2Q7L311 632 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 BAG2O95816 211 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 GH2P01242 217 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 ZNF853P0CG23 659 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 GUCY2DQ02846 1103 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 NR5A1Q13285 461 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 GRAMD1CQ8IYS0 662 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 MRPL47Q9HD33 250 aaKnown RBP11.25□□□□□ -0.61
COL4A6-203ENST00000394872 USH1CQ9Y6N9 552 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 GPC4O75487 556 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 MUM1Q2TAK8 710 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 SGO2Q562F6 1265 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 HINFPQ9BQA5 517 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
COL4A6-203ENST00000394872 ZNF335Q9H4Z2 1342 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-203ENST00000394872 WDR64B1ANS9 1081 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 EPHB1P54762 984 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 ASPHQ12797 758 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 RASGRF1Q13972 1273 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 FAM133AQ8N9E0 248 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 PRPSAP2O60256 369 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 RBL2Q08999 1139 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 CALN1Q9BXU9 219 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 POLR3EQ9NVU0 708 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 367.3 ms