RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 VAV3Q9UKW4 847 aa22.67■■□□□ 1.22
PRKCD-202ENST00000394729 ATAD5Q96QE3 1844 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 PIK3CDO00329 1044 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 IPO5O00410 1097 aaKnown RBP22.66■■□□□ 1.22
PRKCD-202ENST00000394729 ZBED4O75132 1171 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 CASP14P31944 242 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 KCNB1Q14721 858 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 FILIP1LQ4L180 1135 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 CNNM4Q6P4Q7 775 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 KSR1Q8IVT5 923 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 P2RX5Q93086 422 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 RMDN3Q96TC7 470 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 DUSP9Q99956 384 aaKnown RBP22.66■■□□□ 1.22
PRKCD-202ENST00000394729 A0A1B0GTH6 734 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 RNF225M0QZC1 329 aaPredicted RBP22.66■■□□□ 1.22
PRKCD-202ENST00000394729 POTEJP0CG39 1038 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 CASP5P51878 434 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 COPB1P53618 953 aaKnown RBP22.66■■□□□ 1.22
PRKCD-202ENST00000394729 ORC2Q13416 577 aaPredicted RBP22.66■■□□□ 1.22
PRKCD-202ENST00000394729 Q4G0T1 1027 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 ARSHQ5FYA8 562 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 GADL1Q6ZQY3 521 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 DNM3Q9UQ16 869 aa22.66■■□□□ 1.22
PRKCD-202ENST00000394729 CYP11B2P19099 503 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 MMP14P50281 582 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 HAUS3Q68CZ6 603 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 TTI2Q6NXR4 508 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 RNF207Q6ZRF8 634 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 UNC13DQ70J99 1090 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 SYTL5Q8TDW5 730 aaPredicted RBP22.65■■□□□ 1.22
PRKCD-202ENST00000394729 DNAJC19Q96DA6 116 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 PAGR1Q9BTK6 254 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 KCNH7Q9NS40 1196 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 MTIF2P46199 727 aaKnown RBP22.65■■□□□ 1.22
PRKCD-202ENST00000394729 RUSC1Q9BVN2 902 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 NT5C3AQ9H0P0 336 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 UNC45AQ9H3U1 944 aa22.65■■□□□ 1.22
PRKCD-202ENST00000394729 MAGEC2Q9UBF1 373 aaPredicted RBP22.65■■□□□ 1.22
PRKCD-202ENST00000394729 OTOP1Q7RTM1 612 aa22.64■■□□□ 1.22
PRKCD-202ENST00000394729 CCDC155Q8N6L0 562 aa22.64■■□□□ 1.22
PRKCD-202ENST00000394729 ERMNQ8TAM6 284 aa22.64■■□□□ 1.22
PRKCD-202ENST00000394729 TMOD4Q9NZQ9 345 aa22.64■■□□□ 1.22
PRKCD-202ENST00000394729 IMPACTQ9P2X3 320 aa22.64■■□□□ 1.22
PRKCD-202ENST00000394729 TNNT1P13805 278 aa22.64■■□□□ 1.21
PRKCD-202ENST00000394729 FXR1P51114 621 aaKnown RBP eCLIP22.64■■□□□ 1.21
PRKCD-202ENST00000394729 TMEM132BQ14DG7 1078 aa22.64■■□□□ 1.21
PRKCD-202ENST00000394729 SUPT20HL1Q3ZLR7 823 aa22.64■■□□□ 1.21
PRKCD-202ENST00000394729 AS3MTQ9HBK9 375 aa22.64■■□□□ 1.21
PRKCD-202ENST00000394729 CLEC11AQ9Y240 323 aa22.64■■□□□ 1.21
PRKCD-202ENST00000394729 TELO2Q9Y4R8 837 aa22.64■■□□□ 1.21
PRKCD-202ENST00000394729 SSC5DA1L4H1 1573 aa22.64■■□□□ 1.21
PRKCD-202ENST00000394729 USP14P54578 494 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 MRPS9P82933 396 aaKnown RBP22.63■■□□□ 1.21
PRKCD-202ENST00000394729 ARHGEF16Q5VV41 709 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 E4F1Q66K89 784 aaPredicted RBP22.63■■□□□ 1.21
PRKCD-202ENST00000394729 PPFIBP1Q86W92 1011 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 CNOT6LQ96LI5 555 aaKnown RBP22.63■■□□□ 1.21
PRKCD-202ENST00000394729 REEP2Q9BRK0 252 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 R3HDMLQ9H3Y0 253 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 ADARB2Q9NS39 739 aaKnown RBP22.63■■□□□ 1.21
PRKCD-202ENST00000394729 IRF6O14896 467 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 ATP9AO75110 1047 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 FAM26FQ5R3K3 315 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 TC2NQ8N9U0 490 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 CCDC150Q8NCX0 1101 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 ANKRD20A12PQ8NF67 263 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 NAP1L4Q99733 375 aaKnown RBP22.63■■□□□ 1.21
PRKCD-202ENST00000394729 SYNPO2Q9UMS6 1093 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 SOWAHDA6NJG2 315 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 KCNA1Q09470 495 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 UTP14CQ5TAP6 766 aaKnown RBP22.63■■□□□ 1.21
PRKCD-202ENST00000394729 WDR78Q5VTH9 848 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 FAM20AQ96MK3 541 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 MBOAT7Q96N66 472 aa22.63■■□□□ 1.21
PRKCD-202ENST00000394729 KDM3AQ9Y4C1 1321 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 RABGAP1Q9Y3P9 1069 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 A0A0U1RQJ8 604 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 SLITRK3O94933 977 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 CCNE1P24864 410 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 RPA1P27694 616 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 CIITAP33076 1130 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 SFR1Q86XK3 245 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.62■■□□□ 1.21
PRKCD-202ENST00000394729 ATRIPQ8WXE1 791 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 TUBGCP2Q9BSJ2 902 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 CSADQ9Y600 493 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 SNCAIPQ9Y6H5 919 aa22.62■■□□□ 1.21
PRKCD-202ENST00000394729 MTMR1Q13613 665 aa22.61■■□□□ 1.21
PRKCD-202ENST00000394729 EEPD1Q7L9B9 569 aa22.61■■□□□ 1.21
PRKCD-202ENST00000394729 BAG1Q99933 345 aaPredicted RBP22.61■■□□□ 1.21
PRKCD-202ENST00000394729 MAGEF1Q9HAY2 307 aa22.61■■□□□ 1.21
PRKCD-202ENST00000394729 SPTLC3Q9NUV7 552 aa22.61■■□□□ 1.21
PRKCD-202ENST00000394729 TRAF5O00463 557 aa22.61■■□□□ 1.21
PRKCD-202ENST00000394729 PPP1R12BO60237 982 aaPredicted RBP22.61■■□□□ 1.21
PRKCD-202ENST00000394729 PRPF6O94906 941 aaKnown RBP22.61■■□□□ 1.21
PRKCD-202ENST00000394729 SLC12A3P55017 1021 aa22.61■■□□□ 1.21
PRKCD-202ENST00000394729 TOGARAM2Q6ZUX3 1019 aa22.61■■□□□ 1.21
PRKCD-202ENST00000394729 NOC3LQ8WTT2 800 aaKnown RBP22.61■■□□□ 1.21
PRKCD-202ENST00000394729 PSMD10O75832 226 aa22.6■■□□□ 1.21
PRKCD-202ENST00000394729 MYL1P05976 194 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms