RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 LRRC41Q15345 812 aa20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 CCDC181Q5TID7 509 aa20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 HGSNATQ68CP4 663 aa20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 SH3GL2Q99962 352 aa20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 TLR10Q9BXR5 811 aa20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 TMX4Q9H1E5 349 aaPredicted RBP20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 RIOX1Q9H6W3 641 aa20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 DBNDD1Q9H9R9 158 aa20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 KCNQ5Q9NR82 932 aa20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 SLC1A4P43007 532 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 CORO7P57737 925 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 RASSF7Q02833 373 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 TMEM266Q2M3C6 531 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 KLHDC7AQ5VTJ3 777 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 DDX12PQ92771 950 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 MXD3Q9BW11 206 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 ATAD5Q96QE3 1844 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 ANKRD65E5RJM6 399 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 MAGEA9P43362 315 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 EPHB4P54760 987 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 TMEM119Q4V9L6 283 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 TEX11Q8IYF3 940 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 TSEN2Q8NCE0 465 aaKnown RBP20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 SNX29Q8TEQ0 813 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 COA7Q96BR5 231 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 EDEM3Q9BZQ6 932 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 COA1Q9GZY4 146 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 STIM2Q9P246 746 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 MYH7BA7E2Y1 1941 aa20.27■□□□□ 0.84
PCDHA1-202ENST00000394633 FOCADQ5VW36 1801 aa20.27■□□□□ 0.83
PCDHA1-202ENST00000394633 FRMPD2Q68DX3 1309 aaPredicted RBP20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 SSU72P8A0A1W2PR75 194 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 BUB1O43683 1085 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 NOVP48745 357 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 CACNA2D4Q7Z3S7 1137 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 RBM12Q9NTZ6 932 aaKnown RBP20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 ARFGEF1Q9Y6D6 1849 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 PAFAH1B1P43034 410 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 IRAK1P51617 712 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 PSMD2Q13200 908 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 PDIA5Q14554 519 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 TSG101Q99816 390 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 RIC8AQ9NPQ8 531 aa20.26■□□□□ 0.83
PCDHA1-202ENST00000394633 GPR75-ASB3A0A0A6YYF3 556 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 GOLGA8KD6RF30 607 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 RBAK-RBAKDNI3L0D1 243 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 PDHBP11177 359 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 TNFRSF8P28908 595 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 ADCY7P51828 1080 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 PPFIA1Q13136 1202 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 ECM1Q16610 540 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 EMBQ6PCB8 327 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 CERS5Q8N5B7 392 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 TTLL6Q8N841 843 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 MS4A14Q96JA4 679 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 NOX5Q96PH1 765 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 TANGO6Q9C0B7 1094 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 NLRC4Q9NPP4 1024 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 hCG_1984214I3L0E3 225 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 TLR2O60603 784 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 ZCWPW2Q504Y3 356 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 KRT79Q5XKE5 535 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 FOXR2Q6PJQ5 311 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 RNF10Q8N5U6 811 aaKnown RBP20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 ZNF713Q8N859 430 aaPredicted RBP20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 CAVIN3Q969G5 261 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 RAB34Q9BZG1 259 aa20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 PPP1R1BQ9UD71 204 aaPredicted RBP20.25■□□□□ 0.83
PCDHA1-202ENST00000394633 NOL4O94818 638 aa20.24■□□□□ 0.83
PCDHA1-202ENST00000394633 COASYQ13057 564 aa20.24■□□□□ 0.83
PCDHA1-202ENST00000394633 AOC3Q16853 763 aa20.24■□□□□ 0.83
PCDHA1-202ENST00000394633 TDRD12Q587J7 1177 aaKnown RBP20.24■□□□□ 0.83
PCDHA1-202ENST00000394633 DNAJC21Q5F1R6 531 aaKnown RBP20.24■□□□□ 0.83
PCDHA1-202ENST00000394633 C8orf74Q6P047 294 aa20.24■□□□□ 0.83
PCDHA1-202ENST00000394633 MYOCDQ8IZQ8 938 aa20.24■□□□□ 0.83
PCDHA1-202ENST00000394633 DNAJC19Q96DA6 116 aa20.24■□□□□ 0.83
PCDHA1-202ENST00000394633 SGIP1Q9BQI5 828 aa20.24■□□□□ 0.83
PCDHA1-202ENST00000394633 COL4A3BPQ9Y5P4 624 aa20.24■□□□□ 0.83
PCDHA1-202ENST00000394633 HOXA7P31268 230 aaPredicted RBP20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 EHD4Q9H223 541 aa20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 CEP72Q9P209 647 aa20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 MYH4Q9Y623 1939 aa20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 OPA1O60313 960 aa20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 RHBDL3P58872 404 aa20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 SKIDA1Q1XH10 827 aa20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 CAPS2Q9BXY5 557 aa20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 LRRC27Q9C0I9 530 aa20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 ADAMTSL1Q8N6G6 1762 aa20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 GRIN2DO15399 1336 aa20.23■□□□□ 0.83
PCDHA1-202ENST00000394633 EPB41P11171 864 aaKnown RBP20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 POLD1P28340 1107 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 FKBP3Q00688 224 aaKnown RBP20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 SLC9C1Q4G0N8 1177 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 TTMPQ5BVD1 217 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 SFMBT2Q5VUG0 894 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 ALS2CLQ60I27 953 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 ARHGAP27Q6ZUM4 889 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 CERS3Q8IU89 383 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 ARL8AQ96BM9 186 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 TSKSQ9UJT2 592 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms