RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 SCN10AQ9Y5Y9 1956 aa21.48■■□□□ 1.03
TRPT1-202ENST00000394546 HAS3O00219 553 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 SOX1O00570 391 aaPredicted RBP21.47■■□□□ 1.03
TRPT1-202ENST00000394546 DEXIO95424 95 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 CYP2C9P11712 490 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 SREBF1P36956 1147 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 STK3Q13188 491 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 CEP55Q53EZ4 464 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 C9orf50Q5SZB4 431 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 IL17RAQ96F46 866 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 GPR20Q99678 358 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 IL23AQ9NPF7 189 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 GTF2IRD1Q9UHL9 959 aa21.47■■□□□ 1.03
TRPT1-202ENST00000394546 ZNF215Q9UL58 517 aaPredicted RBP21.47■■□□□ 1.03
TRPT1-202ENST00000394546 H3BRB1 525 aa21.46■■□□□ 1.03
TRPT1-202ENST00000394546 PITPNM1O00562 1244 aa21.46■■□□□ 1.03
TRPT1-202ENST00000394546 LGALS2P05162 132 aa21.46■■□□□ 1.03
TRPT1-202ENST00000394546 JAKMIP3Q5VZ66 844 aa21.46■■□□□ 1.03
TRPT1-202ENST00000394546 CAGE1Q8TC20 777 aa21.46■■□□□ 1.03
TRPT1-202ENST00000394546 LRCH3Q96II8 777 aa21.46■■□□□ 1.03
TRPT1-202ENST00000394546 LARP6Q9BRS8 491 aaKnown RBP21.46■■□□□ 1.03
TRPT1-202ENST00000394546 TUT1Q9H6E5 874 aaKnown RBP21.46■■□□□ 1.03
TRPT1-202ENST00000394546 HDAC6Q9UBN7 1215 aa21.46■■□□□ 1.03
TRPT1-202ENST00000394546 PFKMP08237 780 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 KCNA2P16389 499 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 RFC2P35250 354 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 EPHB4P54760 987 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 CCL23P55773 120 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 NLRP5P59047 1200 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 ARHGAP4P98171 946 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 GDF6Q6KF10 455 aaPredicted RBP21.45■■□□□ 1.02
TRPT1-202ENST00000394546 NIPA1Q7RTP0 329 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 SEPT1Q8WYJ6 367 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 PGBD1Q96JS3 809 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 SDF4Q9BRK5 362 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 C16orf70Q9BSU1 422 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 TMEM260Q9NX78 707 aa21.45■■□□□ 1.02
TRPT1-202ENST00000394546 GNAT1P11488 350 aa21.44■■□□□ 1.02
TRPT1-202ENST00000394546 TMEM240Q5SV17 173 aa21.44■■□□□ 1.02
TRPT1-202ENST00000394546 C22orf23Q9BZE7 217 aa21.44■■□□□ 1.02
TRPT1-202ENST00000394546 KCNH7Q9NS40 1196 aa21.44■■□□□ 1.02
TRPT1-202ENST00000394546 MYH7BA7E2Y1 1941 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 MEIS1O00470 390 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 PFKFB2O60825 505 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 ATP9AO75110 1047 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 PPFIA3O75145 1194 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 PARNO95453 639 aaKnown RBP21.43■■□□□ 1.02
TRPT1-202ENST00000394546 FGBP02675 491 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 CYP3A4P08684 503 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 XBP1P17861 261 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 SMAD3P84022 425 aaKnown RBP21.43■■□□□ 1.02
TRPT1-202ENST00000394546 SP4Q02446 784 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 GALNT17Q6IS24 598 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 ZNF365Q70YC5 407 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 AFAP1L1Q8TED9 768 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 PPP1R13LQ8WUF5 828 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.43■■□□□ 1.025e-11■■■□□ 16.3
TRPT1-202ENST00000394546 BCAS3Q9H6U6 928 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 JPH1Q9HDC5 661 aaPredicted RBP21.43■■□□□ 1.02
TRPT1-202ENST00000394546 VPS54Q9P1Q0 977 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 TPCN1Q9ULQ1 816 aa21.43■■□□□ 1.02
TRPT1-202ENST00000394546 NFASCO94856 1347 aa21.42■■□□□ 1.02
TRPT1-202ENST00000394546 ACRP10323 421 aa21.42■■□□□ 1.02
TRPT1-202ENST00000394546 TCF7P36402 384 aaPredicted RBP21.42■■□□□ 1.02
TRPT1-202ENST00000394546 NEK4P51957 841 aa21.42■■□□□ 1.02
TRPT1-202ENST00000394546 AK2P54819 239 aa21.42■■□□□ 1.02
TRPT1-202ENST00000394546 PTK7Q13308 1070 aa21.42■■□□□ 1.02
TRPT1-202ENST00000394546 UMODL1Q5DID0 1318 aa21.42■■□□□ 1.02
TRPT1-202ENST00000394546 UTP14CQ5TAP6 766 aaKnown RBP21.42■■□□□ 1.02
TRPT1-202ENST00000394546 TNPO1Q92973 898 aaKnown RBP21.42■■□□□ 1.02
TRPT1-202ENST00000394546 WNT8AQ9H1J5 351 aa21.42■■□□□ 1.02
TRPT1-202ENST00000394546 PKD2L1Q9P0L9 805 aa21.42■■□□□ 1.02
TRPT1-202ENST00000394546 SLC9A2Q9UBY0 812 aa21.42■■□□□ 1.02
TRPT1-202ENST00000394546 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.41■■□□□ 1.02
TRPT1-202ENST00000394546 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.41■■□□□ 1.02
TRPT1-202ENST00000394546 C17orf102A2RUQ5 167 aa21.41■■□□□ 1.02
TRPT1-202ENST00000394546 SETQ01105 290 aaPredicted RBP21.41■■□□□ 1.02
TRPT1-202ENST00000394546 SCRN1Q12765 414 aa21.41■■□□□ 1.02
TRPT1-202ENST00000394546 FAM109BQ6ICB4 259 aaPredicted RBP21.41■■□□□ 1.02
TRPT1-202ENST00000394546 C16orf59Q7L2K0 433 aa21.41■■□□□ 1.02
TRPT1-202ENST00000394546 HERVK_113Q902F9 699 aa21.41■■□□□ 1.02
TRPT1-202ENST00000394546 WASF1Q92558 559 aa21.41■■□□□ 1.02
TRPT1-202ENST00000394546 SCLYQ96I15 445 aa21.41■■□□□ 1.02
TRPT1-202ENST00000394546 SMARCAD1Q9H4L7 1026 aa21.41■■□□□ 1.02
TRPT1-202ENST00000394546 AGO4Q9HCK5 861 aaKnown RBP21.41■■□□□ 1.02
TRPT1-202ENST00000394546 SEC24BO95487 1268 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 IQCF3P0C7M6 154 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 SMIM10L2AP0DMW4 78 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 SMIM10L2BP0DMW5 78 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 ACTN1P12814 892 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 PLA2G4DQ86XP0 818 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 CYP2W1Q8TAV3 490 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 GLG1Q92896 1179 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 ATP6V0A1Q93050 837 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 AZI2Q9H6S1 392 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 ERAP1Q9NZ08 941 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 PCDHA4Q9UN74 947 aa21.4■■□□□ 1.02
TRPT1-202ENST00000394546 STK36Q9NRP7 1315 aa21.39■■□□□ 1.01
TRPT1-202ENST00000394546 ARP10275 920 aa21.39■■□□□ 1.01
TRPT1-202ENST00000394546 SELPP16109 830 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms