RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CREG2Q8IUH2 290 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 FAM114A1Q8IWE2 563 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 MTMR8Q96EF0 704 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 MS4A14Q96JA4 679 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 TRIM34Q9BYJ4 488 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 EHD4Q9H223 541 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 MAGEF1Q9HAY2 307 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 POTEB3A0JP26 581 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 POTECB2RU33 542 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 TLR2O60603 784 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 EEF2P13639 858 aaKnown RBP14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 RASSF7Q02833 373 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 SKIDA1Q1XH10 827 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 POTEBQ6S5H4 581 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 PRMT6Q96LA8 375 aaPredicted RBP14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 LRRC1Q9BTT6 524 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 IDI2Q9BXS1 227 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 SH2D4AQ9H788 454 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 PI4KBQ9UBF8 816 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 SERPINA10Q9UK55 444 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 ESYT2A0FGR8 921 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 AKR1B10O60218 316 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 IPO7O95373 1038 aaKnown RBP14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 EHHADHQ08426 723 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 SEPT2Q15019 361 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 SPA17Q15506 151 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 MAN2A1Q16706 1144 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 TMEM119Q4V9L6 283 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 KRT79Q5XKE5 535 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 CCDC170Q8IYT3 715 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 DHX36Q9H2U1 1008 aaKnown RBP14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 DEF6Q9H4E7 631 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 RAD17O75943 681 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 NOL4O94818 638 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 IRX5P78411 483 aaPredicted RBP14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 PTPROQ16827 1216 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 TXLNBQ8N3L3 684 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 GUF1Q8N442 669 aaKnown RBP14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 RETREG2Q8NC44 543 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 EXOC4Q96A65 974 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 FAM204AQ9H8W3 233 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 CALCOCO1Q9P1Z2 691 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 HPCAL4Q9UM19 191 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 KIAA1024Q9UPX6 916 aa14.93□□□□□ -0.02
GTF2F1-201ENST00000394456 MYH7BA7E2Y1 1941 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 A0A1W2PQJ5 194 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 ANKRD65E5RJM6 399 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 TRAF5O00463 557 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 FKBP1AP62942 108 aaKnown RBP14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 HDLBPQ00341 1268 aaKnown RBP14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 TMEM266Q2M3C6 531 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 ZHX3Q9H4I2 956 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 SNX12Q9UMY4 172 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 PNMA6FA0A0J9YX94 578 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 MEIS1O00470 390 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 MARCH6O60337 910 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 RNF40O75150 1001 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 CASP5P51878 434 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 HGSNATQ68CP4 663 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 CCDC17Q96LX7 622 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 MRIQ9BWK5 157 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 IKZF4Q9H2S9 585 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 RIC8AQ9NPQ8 531 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 PANK4Q9NVE7 773 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 STK17AQ9UEE5 414 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 PACSIN2Q9UNF0 486 aaPredicted RBP14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 MYH10P35580 1976 aa14.92□□□□□ -0.02
GTF2F1-201ENST00000394456 PVALEFA0A1B0GWK0 134 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 CLK2P49760 499 aaKnown RBP14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 PSMC6P62333 389 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 TDRD12Q587J7 1177 aaKnown RBP14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 FIGNQ5HY92 759 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 PACSIN1Q9BY11 444 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 ZNF277Q9NRM2 450 aaPredicted RBP14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 CLRN2A0PK11 232 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 POTEFA5A3E0 1075 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 AGPSO00116 658 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 POTEIP0CG38 1075 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 GGCXP38435 758 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 MAGEA1P43355 309 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 RNASE9P60153 205 aaKnown RBP14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 JAG1P78504 1218 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 ZCWPW2Q504Y3 356 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 PDXDC1Q6P996 788 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 POTEGQ6S5H5 508 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 POTEEQ6S8J3 1075 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 SELENOOQ9BVL4 669 aa14.91□□□□□ -0.02
GTF2F1-201ENST00000394456 ZSCAN5CA6NGD5 496 aaPredicted RBP14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 TCP10L2B9ZVM9 353 aa14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 MED24O75448 989 aa14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 EIF3JO75822 258 aaKnown RBP14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 HNRNPH3P31942 346 aaKnown RBP14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 POLR2FP61218 127 aaKnown RBP14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 ICA1Q05084 483 aa14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 GPATCH4Q5T3I0 446 aaKnown RBP14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 CCNI2Q6ZMN8 369 aaPredicted RBP14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 ZNF662Q6ZS27 426 aa14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 SIAH1Q8IUQ4 282 aa14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 MYOCDQ8IZQ8 938 aa14.9□□□□□ -0.02
GTF2F1-201ENST00000394456 TTLL6Q8N841 843 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms