RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CENPPQ6IPU0 288 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 TRIM31Q9BZY9 425 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 RASSF4Q9H2L5 321 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 MKRN1Q9UHC7 482 aaKnown RBP11.62□□□□□ -0.55
ACTN1-203ENST00000394419 LCMT1Q9UIC8 334 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 MYO1CO00159 1063 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 HPDP32754 393 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-203ENST00000394419 LRRC63Q05C16 580 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 CFAP58Q5T655 872 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 SLFN13Q68D06 897 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 MSL1Q68DK7 614 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 CCNI2Q6ZMN8 369 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-203ENST00000394419 BARGINQ6ZT62 677 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 ERGIC2Q96RQ1 377 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 SH2D4AQ9H788 454 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 NFU1Q9UMS0 254 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 DNM3Q9UQ16 869 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 CICQ96RK0 1608 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-203ENST00000394419 PVALEFA0A1B0GWK0 134 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 NFIAQ12857 509 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 SF3A3Q12874 501 aaKnown RBP eCLIP11.61□□□□□ -0.554e-7■■■■■ 34.5
ACTN1-203ENST00000394419 PAPD7Q5XG87 772 aaKnown RBP11.61□□□□□ -0.55
ACTN1-203ENST00000394419 DDX4Q9NQI0 724 aaKnown RBP11.61□□□□□ -0.55
ACTN1-203ENST00000394419 HPCAL4Q9UM19 191 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 MYH10P35580 1976 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 GOLGA6L10A6NI86 522 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 H0YHG0 523 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 M0R2N6 131 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 HEXIM1O94992 359 aaKnown RBP11.61□□□□□ -0.55
ACTN1-203ENST00000394419 CFBP00751 764 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 CCT5P48643 541 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 ECM1Q16610 540 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 SHROOM1Q2M3G4 852 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-203ENST00000394419 NAA35Q5VZE5 725 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 TPH2Q8IWU9 490 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 ERMNQ8TAM6 284 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 TEKT1Q969V4 418 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 NT5C3AQ9H0P0 336 aa11.61□□□□□ -0.55
ACTN1-203ENST00000394419 ARMCX3Q9UH62 379 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-203ENST00000394419 SHTN1A0MZ66 631 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 ZSCAN5CA6NGD5 496 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-203ENST00000394419 RASSF10A6NK89 507 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 ABCB4P21439 1286 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 GNGT1P63211 74 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 ZNF543Q08ER8 600 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 MEA1Q16626 185 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 QRICH1Q2TAL8 776 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 CERKLQ49MI3 558 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-203ENST00000394419 FNBP4Q8N3X1 1017 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-203ENST00000394419 ANKS1AQ92625 1134 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 MTMR8Q96EF0 704 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 CCDC43Q96MW1 224 aaKnown RBP11.6□□□□□ -0.55
ACTN1-203ENST00000394419 FGFBP2Q9BYJ0 223 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 RIC8AQ9NPQ8 531 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 RBM12Q9NTZ6 932 aaKnown RBP11.6□□□□□ -0.55
ACTN1-203ENST00000394419 BCS1LQ9Y276 419 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 SAMM50Q9Y512 469 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 ANO9A1A5B4 782 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 DDX39AO00148 427 aaKnown RBP11.6□□□□□ -0.55
ACTN1-203ENST00000394419 ZBTB5O15062 677 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 RHBDL3P58872 404 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 TBC1D10BQ4KMP7 808 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-203ENST00000394419 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
ACTN1-203ENST00000394419 BCAS4Q8TDM0 211 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 PIGOQ8TEQ8 1089 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 FAM184BQ9ULE4 1060 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 ZBTB21Q9ULJ3 1066 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 COL4A1P02462 1669 aa11.6□□□□□ -0.55
ACTN1-203ENST00000394419 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-203ENST00000394419 BBOX1O75936 387 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 KCNH2Q12809 1159 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 WDR93Q6P2C0 686 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 PDXDC1Q6P996 788 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 MICALL1Q8N3F8 863 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 AP1M1Q9BXS5 423 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 TSPYL1Q9H0U9 437 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 BHMT2Q9H2M3 363 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 OPA1O60313 960 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 XRCC5P13010 732 aaKnown RBP11.59□□□□□ -0.55
ACTN1-203ENST00000394419 SEPT2Q15019 361 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 RPS6KA1Q15418 735 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 CDC37Q16543 378 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-203ENST00000394419 VPS36Q86VN1 386 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 DHX37Q8IY37 1157 aaKnown RBP11.59□□□□□ -0.55
ACTN1-203ENST00000394419 SYCP3Q8IZU3 236 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 SH2D3CQ8N5H7 860 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 MYCT1Q8N699 235 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 PACSIN1Q9BY11 444 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 ANO3Q9BYT9 981 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 GOPCQ9HD26 462 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 STIM2Q9P246 746 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 TRIM37O94972 964 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 FAM13AO94988 1023 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 EEF2P13639 858 aaKnown RBP11.59□□□□□ -0.55
ACTN1-203ENST00000394419 SLC9A1P19634 815 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 KLRC1P26715 233 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 GPATCH4Q5T3I0 446 aaKnown RBP11.59□□□□□ -0.55
ACTN1-203ENST00000394419 CCDC174Q6PII3 467 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 IFT20Q8IY31 132 aa11.59□□□□□ -0.55
ACTN1-203ENST00000394419 HDAC9Q9UKV0 1011 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms