RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 FAAP100Q0VG06 881 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 SEMA3FQ13275 785 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 NEDD9Q14511 834 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 NBR1Q14596 966 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 DGKDQ16760 1214 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 NFRKBQ6P4R8 1299 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 FAM126BQ8IXS8 530 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 REXO1Q8N1G1 1221 aaKnown RBP9.78□□□□□ -0.84
APLF-202ENST00000394342 ZFP91Q96JP5 570 aaPredicted RBP9.78□□□□□ -0.84
APLF-202ENST00000394342 LBHD1Q9BQE6 289 aaPredicted RBP9.78□□□□□ -0.84
APLF-202ENST00000394342 ANO3Q9BYT9 981 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 C22orf23Q9BZE7 217 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 MLXIPQ9HAP2 919 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 TMEM39AQ9NV64 488 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 RTEL1Q9NZ71 1219 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 UBIAD1Q9Y5Z9 338 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 PTPRSQ13332 1948 aa9.78□□□□□ -0.84
APLF-202ENST00000394342 TRIM43BA6NCK2 446 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 MAFGO15525 162 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 PPFIA4O75335 1185 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 RBM25P49756 843 aaKnown RBP9.77□□□□□ -0.85
APLF-202ENST00000394342 PSMC6P62333 389 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 PTPN11Q06124 597 aaPredicted RBP9.77□□□□□ -0.85
APLF-202ENST00000394342 TPRNQ4KMQ1 711 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 METTL7BQ6UX53 244 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 SH3RF1Q7Z6J0 888 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 GTF3C6Q969F1 213 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 TRIM43Q96BQ3 446 aaPredicted RBP9.77□□□□□ -0.85
APLF-202ENST00000394342 SPATA33Q96N06 139 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 KATNAL1Q9BW62 490 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 JADE2Q9NQC1 790 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 RYDENQ9NUL5 291 aaKnown RBP9.77□□□□□ -0.85
APLF-202ENST00000394342 VPS54Q9P1Q0 977 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 TBX21Q9UL17 535 aa9.77□□□□□ -0.85
APLF-202ENST00000394342 NOP56O00567 594 aaKnown RBP9.76□□□□□ -0.85
APLF-202ENST00000394342 PPFIA3O75145 1194 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 F2P00734 622 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 CYP3A4P08684 503 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 RAG1P15918 1043 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 KCNA2P16389 499 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 ITGB5P18084 799 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 NLRP5P59047 1200 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 ARHGAP4P98171 946 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 MDM2Q00987 491 aaPredicted RBP9.76□□□□□ -0.85
APLF-202ENST00000394342 MTMR1Q13613 665 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 ME3Q16798 604 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 NBPF20Q3BBV1 942 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 HSDL1Q3SXM5 330 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 CEP55Q53EZ4 464 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 HABP4Q5JVS0 413 aaKnown RBP9.76□□□□□ -0.85
APLF-202ENST00000394342 JAKMIP3Q5VZ66 844 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 GALNT17Q6IS24 598 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 CYFIP1Q7L576 1253 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 NIPA1Q7RTP0 329 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 SESTD1Q86VW0 696 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 IL27Q8NEV9 243 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 KAT2BQ92831 832 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 PGBD1Q96JS3 809 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 KIF2CQ99661 725 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 MXRA8Q9BRK3 442 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 UBE2OQ9C0C9 1292 aaKnown RBP9.76□□□□□ -0.85
APLF-202ENST00000394342 UPF2Q9HAU5 1272 aaKnown RBP9.76□□□□□ -0.85
APLF-202ENST00000394342 TMEM260Q9NX78 707 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 ARID2Q68CP9 1835 aa9.76□□□□□ -0.85
APLF-202ENST00000394342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.75□□□□□ -0.85
APLF-202ENST00000394342 HAS3O00219 553 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 MEIS1O00470 390 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 GTPBP6O43824 516 aaPredicted RBP9.75□□□□□ -0.85
APLF-202ENST00000394342 SORBS3O60504 671 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 B4GALT4O60513 344 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 LARGE1O95461 756 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 CTDNEP1O95476 244 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 TIMP1P01033 207 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 SUPT20HL2P0C7V6 817 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 ZNF286BP0CG31 522 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 XBP1P17861 261 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 ZNF76P36508 570 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 PSEN2P49810 448 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 ZNF579Q8NAF0 562 aaKnown RBP9.75□□□□□ -0.85
APLF-202ENST00000394342 DAGLBQ8NCG7 672 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 CRYGNQ8WXF5 182 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 WASF1Q92558 559 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 BADQ92934 168 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 GPR20Q99678 358 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 PCDHA4Q9UN74 947 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 LIMCH1Q9UPQ0 1083 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 NFASCO94856 1347 aa9.75□□□□□ -0.85
APLF-202ENST00000394342 TRANK1O15050 2925 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 ADAMTS3O15072 1205 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 ATP9AO75110 1047 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 LGALS2P05162 132 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 ITGB8P26012 769 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 SETQ01105 290 aaPredicted RBP9.74□□□□□ -0.85
APLF-202ENST00000394342 MFSD10Q14728 455 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 RABEP1Q15276 862 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 KIAA0753Q2KHM9 967 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 FAM47CQ5HY64 1035 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 MFSD5Q6N075 450 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 TDHQ8IZJ6 230 aa9.74□□□□□ -0.85
APLF-202ENST00000394342 BLIDQ8IZY5 108 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms