RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 BBOX1O75936 387 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 GNA11P29992 359 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L24Q0WX57 530 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 CALCRLQ16602 461 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 CRY2Q49AN0 593 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L6PQ6QN14 398 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 CCDC43Q96MW1 224 aaKnown RBP10.98□□□□□ -0.65
PSEN1-204ENST00000394164 CCT8L2Q96SF2 557 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 VCPKMTQ9H867 229 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 MTMR4Q9NYA4 1195 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 KIAA1551Q9HCM1 1747 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 ZSCAN5CA6NGD5 496 aaPredicted RBP10.98□□□□□ -0.65
PSEN1-204ENST00000394164 TRIM21P19474 475 aaKnown RBP10.98□□□□□ -0.65
PSEN1-204ENST00000394164 GCKP35557 465 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 IKQ13123 557 aaPredicted RBP10.98□□□□□ -0.65
PSEN1-204ENST00000394164 ACCSLQ4AC99 568 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 CCDC70Q6NSX1 233 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 FAM228AQ86W67 206 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 PARP9Q8IXQ6 854 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 ADGRF4Q8IZF3 695 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 LIMA1Q9UHB6 759 aaKnown RBP10.98□□□□□ -0.65
PSEN1-204ENST00000394164 IRF6O14896 467 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 ADCY7P51828 1080 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 CKAP4Q07065 602 aaKnown RBP10.97□□□□□ -0.65
PSEN1-204ENST00000394164 CCDC121Q6ZUS5 278 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 MICALCLQ6ZW33 695 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 KRT25Q7Z3Z0 450 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 NLRP14Q86W24 1093 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 ANKS1AQ92625 1134 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 TRIM9Q9C026 710 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 TARSL2A2RTX5 802 aaKnown RBP10.97□□□□□ -0.65
PSEN1-204ENST00000394164 PSMD14O00487 310 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 PPP1R11O60927 126 aaPredicted RBP10.97□□□□□ -0.65
PSEN1-204ENST00000394164 GDF11O95390 407 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 EZRP15311 586 aaKnown RBP10.97□□□□□ -0.65
PSEN1-204ENST00000394164 PLCG2P16885 1265 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 TBC1D8BQ0IIM8 1120 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 ENOX2Q16206 610 aaKnown RBP10.97□□□□□ -0.65
PSEN1-204ENST00000394164 KCNK18Q7Z418 384 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 PROM2Q8N271 834 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 CALR3Q96L12 384 aaKnown RBP10.97□□□□□ -0.65
PSEN1-204ENST00000394164 TUBGCP2Q9BSJ2 902 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 MMTAG2Q9BU76 263 aaKnown RBP10.97□□□□□ -0.65
PSEN1-204ENST00000394164 SPZ1Q9BXG8 430 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 A1CFQ9NQ94 594 aaKnown RBP10.97□□□□□ -0.65
PSEN1-204ENST00000394164 MYO1AQ9UBC5 1043 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 SERPINB13Q9UIV8 391 aa10.97□□□□□ -0.65
PSEN1-204ENST00000394164 TPX2Q9ULW0 747 aaKnown RBP10.97□□□□□ -0.65
PSEN1-204ENST00000394164 LUC7L2Q9Y383 392 aaKnown RBP10.97□□□□□ -0.65
PSEN1-204ENST00000394164 NCK2O43639 380 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 FAM153BP0C7A2 387 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 SMTNP53814 917 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 RNASE9P60153 205 aaKnown RBP10.96□□□□□ -0.65
PSEN1-204ENST00000394164 FAM153CQ494X1 144 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 USH1GQ495M9 461 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 CDC42EP5Q6NZY7 148 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 CYB5D1Q6P9G0 228 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 SLC30A10Q6XR72 485 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 MB21D1Q8N884 522 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 SNX29Q8TEQ0 813 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 THOC1Q96FV9 657 aaKnown RBP10.96□□□□□ -0.65
PSEN1-204ENST00000394164 CALML4Q96GE6 196 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 EPN3Q9H201 632 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 KIF9Q9HAQ2 790 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 FAM207AQ9NSI2 230 aaPredicted RBP10.96□□□□□ -0.65
PSEN1-204ENST00000394164 KBTBD4Q9NVX7 518 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 BCCIPQ9P287 314 aaKnown RBP eCLIP10.96□□□□□ -0.65
PSEN1-204ENST00000394164 FAM153AQ9UHL3 310 aa10.96□□□□□ -0.65
PSEN1-204ENST00000394164 ENO4A6NNW6 628 aa10.96□□□□□ -0.66
PSEN1-204ENST00000394164 H7C1D1 291 aa10.96□□□□□ -0.66
PSEN1-204ENST00000394164 NFRKBQ6P4R8 1299 aa10.96□□□□□ -0.66
PSEN1-204ENST00000394164 CNOT6LQ96LI5 555 aaKnown RBP10.96□□□□□ -0.66
PSEN1-204ENST00000394164 DUSP9Q99956 384 aaKnown RBP10.96□□□□□ -0.66
PSEN1-204ENST00000394164 NOC4LQ9BVI4 516 aaKnown RBP10.96□□□□□ -0.66
PSEN1-204ENST00000394164 JMJD4Q9H9V9 463 aa10.96□□□□□ -0.66
PSEN1-204ENST00000394164 NPHP3-ACAD11A0A0J9YXS1 232 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 MYMKA6NI61 221 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 RASSF9O75901 435 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
PSEN1-204ENST00000394164 KRT26Q7Z3Y9 468 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 MAATS1Q7Z4T9 603 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 SLF2Q8IX21 1173 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 SPICE1Q8N0Z3 855 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 GIMAP8Q8ND71 665 aaPredicted RBP10.95□□□□□ -0.66
PSEN1-204ENST00000394164 MYCBPAPQ8TBZ2 947 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 NOC3LQ8WTT2 800 aaKnown RBP10.95□□□□□ -0.66
PSEN1-204ENST00000394164 TANGO6Q9C0B7 1094 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 BAIAP2L1Q9UHR4 511 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 NFU1Q9UMS0 254 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 ROBO3Q96MS0 1386 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 LAMB1P07942 1786 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 DNM1LO00429 736 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 PLEKP08567 350 aaPredicted RBP10.95□□□□□ -0.66
PSEN1-204ENST00000394164 MMP10P09238 476 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 NR1D1P20393 614 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 STAT3P40763 770 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 ECM1Q16610 540 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 PTGISQ16647 500 aa10.95□□□□□ -0.66
PSEN1-204ENST00000394164 CFAP58Q5T655 872 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms