RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ARP10275 920 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 FDPSP14324 419 aaKnown RBP8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 RAG1P15918 1043 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 KCNA2P16389 499 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 CYP2C18P33260 490 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 SREBF1P36956 1147 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 PSEN2P49810 448 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 NLRP5P59047 1200 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 ARHGAP4P98171 946 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 AP3B2Q13367 1082 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 MFSD10Q14728 455 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 ANKRD1Q15327 319 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 NPY5RQ15761 445 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 DGKDQ16760 1214 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 C9orf50Q5SZB4 431 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 UTP14CQ5TAP6 766 aaKnown RBP8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 XRRA1Q6P2D8 792 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 KCNV1Q6PIU1 500 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 CPLX2Q6PUV4 134 aaKnown RBP8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 METTL7BQ6UX53 244 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 NLRX1Q86UT6 975 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 CCDC148Q8NFR7 591 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 CCDC12Q8WUD4 166 aaPredicted RBP8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 GTF3C6Q969F1 213 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 GPRASP2Q96D09 838 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 GPR20Q99678 358 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 MXRA8Q9BRK3 442 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 EHMT1Q9H9B1 1298 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 JADE2Q9NQC1 790 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 FARP1Q9Y4F1 1045 aaPredicted RBP8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 MROH7Q68CQ1 1323 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 KIAA1217Q5T5P2 1943 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 CEP290O15078 2479 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 DDX39AO00148 427 aaKnown RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 EDIL3O43854 480 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 KPNA6O60684 536 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 CDKL5O76039 1030 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 F2P00734 622 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 TIMP1P01033 207 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 FOSP01100 380 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 LGALS2P05162 132 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 TGFB3P10600 412 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 HOXD8P13378 290 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 GNA11P29992 359 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 ZNF76P36508 570 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 RBM25P49756 843 aaKnown RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 CCL23P55773 120 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 ZNF200P98182 395 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 ITGB3BPQ13352 177 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 NEDD9Q14511 834 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 HIC1Q14526 733 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 KIAA0753Q2KHM9 967 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 CEP55Q53EZ4 464 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 GDF6Q6KF10 455 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 CCDC83Q8IWF9 413 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 NSUN7Q8NE18 718 aaKnown RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 C16orf70Q9BSU1 422 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 NOC4LQ9BVI4 516 aaKnown RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 HIPK3Q9H422 1215 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 AGO4Q9HCK5 861 aaKnown RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 KCNH7Q9NS40 1196 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 ORC3Q9UBD5 711 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 HDAC6Q9UBN7 1215 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 PCDHA4Q9UN74 947 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 LAMA2P24043 3122 aaKnown RBP8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 STK36Q9NRP7 1315 aa8.75□□□□□ -1.01
HMGB3P1-201ENST00000393368 IGLV3-22A0A075B6J6 115 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 HAS3O00219 553 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 CD2BP2O95400 341 aaKnown RBP8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 ACRP10323 421 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 CSF2RAP15509 400 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 MARK3P27448 753 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 BMP8BP34820 402 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 TCF7P36402 384 aaPredicted RBP8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 FXR1P51114 621 aaKnown RBP eCLIP8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 FPGSQ05932 587 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 SHHQ15465 462 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 NFRKBQ6P4R8 1299 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 PLA2G4DQ86XP0 818 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 TDHQ8IZJ6 230 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 BLIDQ8IZY5 108 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 C7orf31Q8N865 590 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 CRYGNQ8WXF5 182 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 WNT8BQ93098 351 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 GJA10Q969M2 543 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 SCLYQ96I15 445 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 LRCH3Q96II8 777 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 CTAGE1Q96RT6 745 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 SENP7Q9BQF6 1050 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 GLT8D2Q9H1C3 349 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 WNT8AQ9H1J5 351 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 SH3GLB2Q9NR46 395 aa8.74□□□□□ -1.01
HMGB3P1-201ENST00000393368 DOCK5Q9H7D0 1870 aa8.73□□□□□ -1.01
HMGB3P1-201ENST00000393368 GSTTP1A0A1W2PQM5 241 aa8.73□□□□□ -1.01
HMGB3P1-201ENST00000393368 FAM205CA6NFA0 338 aa8.73□□□□□ -1.01
HMGB3P1-201ENST00000393368 H3BRB1 525 aa8.73□□□□□ -1.01
HMGB3P1-201ENST00000393368 M0R2N6 131 aa8.73□□□□□ -1.01
HMGB3P1-201ENST00000393368 MEIS1O00470 390 aa8.73□□□□□ -1.01
HMGB3P1-201ENST00000393368 PPFIA4O75335 1185 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms