RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 ZSCAN16Q9H4T2 348 aaPredicted RBP28.76■■■□□ 2.19
HOMER3-202ENST00000392351 OGDHLQ9ULD0 1010 aa28.76■■■□□ 2.19
HOMER3-202ENST00000392351 POTEFA5A3E0 1075 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 NEMFO60524 1076 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 FARP2O94887 1054 aaPredicted RBP28.75■■■□□ 2.19
HOMER3-202ENST00000392351 LAMC2Q13753 1193 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 ZNF174Q15697 407 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 METTL7BQ6UX53 244 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 SDF4Q9BRK5 362 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 MYADML2A6NDP7 307 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 ETNPPLQ8TBG4 499 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 GJA10Q969M2 543 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 EMID1Q96A84 441 aaPredicted RBP28.75■■■□□ 2.19
HOMER3-202ENST00000392351 SPATA33Q96N06 139 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 PCDHB6Q9Y5E3 794 aa28.75■■■□□ 2.19
HOMER3-202ENST00000392351 NFASCO94856 1347 aa28.74■■■□□ 2.19
HOMER3-202ENST00000392351 CCDC85CA6NKD9 419 aa28.74■■■□□ 2.19
HOMER3-202ENST00000392351 BEX3Q00994 111 aa28.74■■■□□ 2.19
HOMER3-202ENST00000392351 SP4Q02446 784 aa28.74■■■□□ 2.19
HOMER3-202ENST00000392351 LRRC41Q15345 812 aa28.74■■■□□ 2.19
HOMER3-202ENST00000392351 FSCN1Q16658 493 aaKnown RBP28.74■■■□□ 2.19
HOMER3-202ENST00000392351 RNF180Q86T96 592 aa28.74■■■□□ 2.19
HOMER3-202ENST00000392351 KCNMB3Q9NPA1 279 aa28.74■■■□□ 2.19
HOMER3-202ENST00000392351 CTAGE5O15320 804 aa28.73■■■□□ 2.19
HOMER3-202ENST00000392351 F13A1P00488 732 aa28.73■■■□□ 2.19
HOMER3-202ENST00000392351 ORC2Q13416 577 aaPredicted RBP28.73■■■□□ 2.19
HOMER3-202ENST00000392351 GNASQ5JWF2 1037 aa28.73■■■□□ 2.19
HOMER3-202ENST00000392351 FAM173BQ6P4H8 233 aa28.73■■■□□ 2.19
HOMER3-202ENST00000392351 ARRDC4Q8NCT1 418 aa28.73■■■□□ 2.19
HOMER3-202ENST00000392351 AFG1LQ8WV93 481 aa28.73■■■□□ 2.19
HOMER3-202ENST00000392351 SLC5A5Q92911 643 aa28.73■■■□□ 2.19
HOMER3-202ENST00000392351 JPH1Q9HDC5 661 aaPredicted RBP28.73■■■□□ 2.19
HOMER3-202ENST00000392351 DDX39AO00148 427 aaKnown RBP28.72■■■□□ 2.19
HOMER3-202ENST00000392351 DHX15O43143 795 aaKnown RBP28.72■■■□□ 2.19
HOMER3-202ENST00000392351 CPT1AP50416 773 aa28.72■■■□□ 2.19
HOMER3-202ENST00000392351 CALCRLQ16602 461 aa28.72■■■□□ 2.19
HOMER3-202ENST00000392351 HSDL1Q3SXM5 330 aa28.72■■■□□ 2.19
HOMER3-202ENST00000392351 PPTC7Q8NI37 304 aa28.72■■■□□ 2.19
HOMER3-202ENST00000392351 TBC1D22BQ9NU19 505 aa28.72■■■□□ 2.19
HOMER3-202ENST00000392351 MARCH6O60337 910 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 BRD1O95696 1058 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 DDIT3P35638 169 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 NKX3-2P78367 333 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 LRCH2Q5VUJ6 765 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 KLHDC9Q8NEP7 349 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 HAS1Q92839 578 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 SLC9A2Q9UBY0 812 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 A6NJR5 290 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 NOP56O00567 594 aaKnown RBP28.71■■■□□ 2.19
HOMER3-202ENST00000392351 TBX3O15119 743 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 GAS7O60861 476 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 CST5P28325 142 aaPredicted RBP28.71■■■□□ 2.19
HOMER3-202ENST00000392351 BRDTQ58F21 947 aaPredicted RBP28.71■■■□□ 2.19
HOMER3-202ENST00000392351 FAM20AQ96MK3 541 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 RIT2Q99578 217 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 TMEM60Q9H2L4 133 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.71■■■□□ 2.19
HOMER3-202ENST00000392351 ZDHHC9Q9Y397 364 aa28.71■■■□□ 2.19
HOMER3-202ENST00000392351 MMP3P08254 477 aa28.7■■■□□ 2.18
HOMER3-202ENST00000392351 TELO2Q9Y4R8 837 aa28.7■■■□□ 2.18
HOMER3-202ENST00000392351 KBTBD13C9JR72 458 aa28.69■■■□□ 2.18
HOMER3-202ENST00000392351 DNM1LO00429 736 aa28.69■■■□□ 2.18
HOMER3-202ENST00000392351 BAG4O95429 457 aaKnown RBP28.69■■■□□ 2.18
HOMER3-202ENST00000392351 EN2P19622 333 aaPredicted RBP28.69■■■□□ 2.18
HOMER3-202ENST00000392351 SOX10P56693 466 aa28.69■■■□□ 2.18
HOMER3-202ENST00000392351 SLFN12Q8IYM2 578 aa28.69■■■□□ 2.18
HOMER3-202ENST00000392351 IPO9Q96P70 1041 aaKnown RBP28.69■■■□□ 2.18
HOMER3-202ENST00000392351 TEKT3Q9BXF9 490 aa28.69■■■□□ 2.18
HOMER3-202ENST00000392351 TCEAL9Q9UHQ7 104 aa28.69■■■□□ 2.18
HOMER3-202ENST00000392351 DNAH12Q6ZR08 3092 aa28.69■■■□□ 2.18
HOMER3-202ENST00000392351 PSMD10O75832 226 aa28.68■■■□□ 2.18
HOMER3-202ENST00000392351 KCNA10Q16322 511 aa28.68■■■□□ 2.18
HOMER3-202ENST00000392351 PCSK9Q8NBP7 692 aaKnown RBP28.68■■■□□ 2.18
HOMER3-202ENST00000392351 MTMR9Q96QG7 549 aa28.68■■■□□ 2.18
HOMER3-202ENST00000392351 GPR20Q99678 358 aa28.68■■■□□ 2.18
HOMER3-202ENST00000392351 WDR81Q562E7 1941 aa28.68■■■□□ 2.18
HOMER3-202ENST00000392351 ZEB2O60315 1214 aa28.67■■■□□ 2.18
HOMER3-202ENST00000392351 OR52Z1P0C646 297 aa28.67■■■□□ 2.18
HOMER3-202ENST00000392351 PTGDRQ13258 359 aa28.67■■■□□ 2.18
HOMER3-202ENST00000392351 DGKDQ16760 1214 aa28.67■■■□□ 2.18
HOMER3-202ENST00000392351 CCSAPQ6IQ19 270 aaPredicted RBP28.67■■■□□ 2.18
HOMER3-202ENST00000392351 CCNE2O96020 404 aa28.67■■■□□ 2.18
HOMER3-202ENST00000392351 CAPN2P17655 700 aa28.67■■■□□ 2.18
HOMER3-202ENST00000392351 KRT76Q01546 638 aa28.67■■■□□ 2.18
HOMER3-202ENST00000392351 FOXD4L6Q3SYB3 417 aaPredicted RBP28.67■■■□□ 2.18
HOMER3-202ENST00000392351 FOXD4L3Q6VB84 417 aaPredicted RBP28.67■■■□□ 2.18
HOMER3-202ENST00000392351 ANKLE1Q8NAG6 615 aa28.67■■■□□ 2.18
HOMER3-202ENST00000392351 FTOQ9C0B1 505 aaKnown RBP eCLIP28.67■■■□□ 2.18
HOMER3-202ENST00000392351 ELP1O95163 1332 aa28.66■■■□□ 2.18
HOMER3-202ENST00000392351 CHMP2AO43633 222 aa28.66■■■□□ 2.18
HOMER3-202ENST00000392351 ASGR1P07306 291 aa28.66■■■□□ 2.18
HOMER3-202ENST00000392351 TXKP42681 527 aa28.66■■■□□ 2.18
HOMER3-202ENST00000392351 MNX1P50219 401 aaPredicted RBP28.66■■■□□ 2.18
HOMER3-202ENST00000392351 ACTR2P61160 394 aa28.66■■■□□ 2.18
HOMER3-202ENST00000392351 NUCB2P80303 420 aa28.66■■■□□ 2.18
HOMER3-202ENST00000392351 C4orf32Q8N8J7 132 aa28.66■■■□□ 2.18
HOMER3-202ENST00000392351 TSEN34Q9BSV6 310 aaKnown RBP28.66■■■□□ 2.18
HOMER3-202ENST00000392351 MYL3P08590 195 aa28.65■■■□□ 2.18
HOMER3-202ENST00000392351 ACLYP53396 1101 aa28.65■■■□□ 2.18
HOMER3-202ENST00000392351 SF3A1Q15459 793 aaKnown RBP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms