RNA–Protein interactions for RNA: ENST00000392244.7

SUMO1-201, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 2 BASIC

Gene SUMO1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-201ENST00000392244 SDF4Q9BRK5 362 aa18.81■□□□□ 0.6
SUMO1-201ENST00000392244 RNF208Q9H0X6 261 aa18.81■□□□□ 0.6
SUMO1-201ENST00000392244 TBC1D22BQ9NU19 505 aa18.81■□□□□ 0.6
SUMO1-201ENST00000392244 PKD2L1Q9P0L9 805 aa18.81■□□□□ 0.6
SUMO1-201ENST00000392244 LAD1O00515 517 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 FARP2O94887 1054 aaPredicted RBP18.8■□□□□ 0.6
SUMO1-201ENST00000392244 BAG4O95429 457 aaKnown RBP18.8■□□□□ 0.6
SUMO1-201ENST00000392244 NKX3-2P78367 333 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 LAMC2Q13753 1193 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 GJC2Q5T442 439 aaPredicted RBP18.8■□□□□ 0.6
SUMO1-201ENST00000392244 COL13A1Q5TAT6 717 aaPredicted RBP18.8■□□□□ 0.6
SUMO1-201ENST00000392244 LHX8Q68G74 356 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 ATL3Q6DD88 541 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 METTL7BQ6UX53 244 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 DHX37Q8IY37 1157 aaKnown RBP18.8■□□□□ 0.6
SUMO1-201ENST00000392244 SLFN12Q8IYM2 578 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 C4orf32Q8N8J7 132 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 OR6J1Q8NGC5 347 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 HAS1Q92839 578 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 UPF3AQ9H1J1 476 aaKnown RBP18.8■□□□□ 0.6
SUMO1-201ENST00000392244 TMEM60Q9H2L4 133 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 CEP131Q9UPN4 1083 aa18.8■□□□□ 0.6
SUMO1-201ENST00000392244 SYNRGQ9UMZ2 1314 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 DHX15O43143 795 aaKnown RBP18.79■□□□□ 0.6
SUMO1-201ENST00000392244 MYCP01106 439 aaPredicted RBP18.79■□□□□ 0.6
SUMO1-201ENST00000392244 OR52Z1P0C646 297 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 GJA9P57773 515 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 ATP2C1P98194 919 aaPredicted RBP18.79■□□□□ 0.6
SUMO1-201ENST00000392244 PTGDRQ13258 359 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 SF3A1Q15459 793 aaKnown RBP18.79■□□□□ 0.6
SUMO1-201ENST00000392244 LRCH2Q5VUJ6 765 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 ANO1Q5XXA6 986 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 CYFIP1Q7L576 1253 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 USP28Q96RU2 1077 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 TEKT3Q9BXF9 490 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 AP5M1Q9H0R1 490 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 MLXIPQ9HAP2 919 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 JPH1Q9HDC5 661 aaPredicted RBP18.79■□□□□ 0.6
SUMO1-201ENST00000392244 XPNPEP3Q9NQH7 507 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 POLR3EQ9NVU0 708 aa18.79■□□□□ 0.6
SUMO1-201ENST00000392244 TCHHQ07283 1943 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 MARCH6O60337 910 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 GAS7O60861 476 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 PSMD10O75832 226 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 GJB1P08034 283 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 PTGS1P23219 599 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 PRPHP41219 470 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 DEFB118Q96PH6 123 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 FTOQ9C0B1 505 aaKnown RBP eCLIP18.78■□□□□ 0.6
SUMO1-201ENST00000392244 BCAS3Q9H6U6 928 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 SPC25Q9HBM1 224 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 SLC9A2Q9UBY0 812 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 CLIC4Q9Y696 253 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 MORC2Q9Y6X9 1032 aaPredicted RBP18.78■□□□□ 0.6
SUMO1-201ENST00000392244 WDR81Q562E7 1941 aa18.78■□□□□ 0.6
SUMO1-201ENST00000392244 POTEFA5A3E0 1075 aa18.77■□□□□ 0.6
SUMO1-201ENST00000392244 DYNC1LI2O43237 492 aaPredicted RBP18.77■□□□□ 0.6
SUMO1-201ENST00000392244 ADAMTS4O75173 837 aa18.77■□□□□ 0.6
SUMO1-201ENST00000392244 NASPP49321 788 aaPredicted RBP18.77■□□□□ 0.6
SUMO1-201ENST00000392244 KRT76Q01546 638 aa18.77■□□□□ 0.6
SUMO1-201ENST00000392244 PTPAQ15257 358 aa18.77■□□□□ 0.6
SUMO1-201ENST00000392244 PPTC7Q8NI37 304 aa18.77■□□□□ 0.6
SUMO1-201ENST00000392244 GJA10Q969M2 543 aa18.77■□□□□ 0.6
SUMO1-201ENST00000392244 SPATA33Q96N06 139 aa18.77■□□□□ 0.6
SUMO1-201ENST00000392244 UIMC1Q96RL1 719 aa18.77■□□□□ 0.6
SUMO1-201ENST00000392244 TCEAL9Q9UHQ7 104 aa18.77■□□□□ 0.6
SUMO1-201ENST00000392244 VAV3Q9UKW4 847 aa18.77■□□□□ 0.6
SUMO1-201ENST00000392244 A6NJR5 290 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 DDX39AO00148 427 aaKnown RBP18.76■□□□□ 0.59
SUMO1-201ENST00000392244 CTAGE5O15320 804 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 SORBS3O60504 671 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 PGK1P00558 417 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 CST5P28325 142 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-201ENST00000392244 CPT1AP50416 773 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 DNM1Q05193 864 aaKnown RBP18.76■□□□□ 0.59
SUMO1-201ENST00000392244 PPP2R5CQ13362 524 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 HSDL1Q3SXM5 330 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 FOXD4L6Q3SYB3 417 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-201ENST00000392244 ARL6IP4Q66PJ3 421 aaKnown RBP18.76■□□□□ 0.59
SUMO1-201ENST00000392244 ZNF746Q6NUN9 644 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-201ENST00000392244 B3GNT9Q6UX72 402 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 FOXD4L3Q6VB84 417 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-201ENST00000392244 CRISPLD2Q9H0B8 497 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 TTC12Q9H892 705 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-201ENST00000392244 CFAP45Q9UL16 551 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 OGDHLQ9ULD0 1010 aa18.76■□□□□ 0.59
SUMO1-201ENST00000392244 ELP1O95163 1332 aa18.75■□□□□ 0.59
SUMO1-201ENST00000392244 NOP56O00567 594 aaKnown RBP18.75■□□□□ 0.59
SUMO1-201ENST00000392244 SGPL1O95470 568 aa18.75■□□□□ 0.59
SUMO1-201ENST00000392244 YEATS4O95619 227 aa18.75■□□□□ 0.59
SUMO1-201ENST00000392244 CCNE2O96020 404 aa18.75■□□□□ 0.59
SUMO1-201ENST00000392244 MMP3P08254 477 aa18.75■□□□□ 0.59
SUMO1-201ENST00000392244 C6orf222P0C671 652 aaPredicted RBP18.75■□□□□ 0.59
SUMO1-201ENST00000392244 ATXN8OSP0DMR3 200 aa18.75■□□□□ 0.59
SUMO1-201ENST00000392244 HOXD8P13378 290 aaPredicted RBP18.75■□□□□ 0.59
SUMO1-201ENST00000392244 CAPN2P17655 700 aa18.75■□□□□ 0.59
SUMO1-201ENST00000392244 TXKP42681 527 aa18.75■□□□□ 0.59
SUMO1-201ENST00000392244 KRT85P78386 507 aa18.75■□□□□ 0.59
SUMO1-201ENST00000392244 SLC39A14Q15043 492 aa18.75■□□□□ 0.59
SUMO1-201ENST00000392244 FSCN1Q16658 493 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms