RNA–Protein interactions for RNA: ENST00000391998.3

TPM3P6-201, Transcript of tropomyosin 3 pseudogene 6, humanhuman

BASIC

Gene TPM3P6, Length 742 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P6-201ENST00000391998 RALYLQ86SE5 291 aaKnown RBP11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 NLRX1Q86UT6 975 aa11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 GJD3Q8N144 294 aa11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 DBF4BQ8NFT6 615 aa11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 TBC1D5Q92609 795 aa11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 INPP4AQ96PE3 977 aaPredicted RBP11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 YME1L1Q96TA2 773 aa11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 POP1Q99575 1024 aaKnown RBP11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 LRFN3Q9BTN0 628 aa11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 PLVAPQ9BX97 442 aa11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 MAD2L2Q9UI95 211 aa11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 CHD9Q3L8U1 2897 aa11.16□□□□□ -0.62
TPM3P6-201ENST00000391998 LRRC37A2A6NM11 1700 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 FRMPD4Q14CM0 1322 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 SPATA31C2B4DYI2 1134 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 C5orf67F2Z3F1 127 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 RGS20O76081 388 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 MYCLP12524 364 aaPredicted RBP11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 UBA1P22314 1058 aaKnown RBP11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 DEFB103AP81534 67 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 GRM4Q14833 912 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 COL19A1Q14993 1142 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 SEC23AQ15436 765 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 PKN1Q16512 942 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 FAM178BQ8IXR5 827 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 MYOCDQ8IZQ8 938 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 NCOA7Q8NI08 942 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 NEK9Q8TD19 979 aa11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 PABPC5Q96DU9 382 aaKnown RBP11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 C11orf84Q9BUA3 381 aaPredicted RBP11.15□□□□□ -0.62
TPM3P6-201ENST00000391998 GRXCR2A6NFK2 248 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 OPLAHO14841 1288 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 LGALS2P05162 132 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 ZNF286BP0CG31 522 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 SMIM10L2AP0DMW4 78 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 SMIM10L2BP0DMW5 78 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 EPC2Q52LR7 807 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 PCNX4Q63HM2 1172 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 BANK1Q8NDB2 785 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 GPRASP2Q96D09 838 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 IL17RAQ96F46 866 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 FTHL17Q9BXU8 183 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 RNPEPQ9H4A4 650 aa11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 NSUN3Q9H649 340 aaKnown RBP11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 SEC63Q9UGP8 760 aaKnown RBP11.14□□□□□ -0.63
TPM3P6-201ENST00000391998 LCHNA4D1U4 455 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 IFIT3O14879 490 aaKnown RBP11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 DDAH1O94760 285 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 CALM1P0DP23 149 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 CALM2P0DP24 149 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 CALM3P0DP25 149 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 TROAPQ12815 778 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 WTAPQ15007 396 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 CSPP1Q1MSJ5 1256 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 TMEM192Q8IY95 271 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 CTCFLQ8NI51 663 aaPredicted RBP11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 SMARCC2Q8TAQ2 1214 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 GDPD5Q8WTR4 605 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 RRP36Q96EU6 259 aaKnown RBP11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 NECAB3Q96P71 396 aaPredicted RBP11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 GPR20Q99678 358 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 SPZ1Q9BXG8 430 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 IFIH1Q9BYX4 1025 aaKnown RBP11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 EPHX3Q9H6B9 360 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 EHMT1Q9H9B1 1298 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 ERAP1Q9NZ08 941 aa11.13□□□□□ -0.63
TPM3P6-201ENST00000391998 RRN3P2A6NIE6 340 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 ARHGEF15O94989 841 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 KCNA5P22460 613 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 GPM6BQ13491 265 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 MBTPS1Q14703 1052 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 ODR4Q5SWX8 454 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 IER5Q5VY09 327 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 STAG2Q8N3U4 1231 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 NME8Q8N427 588 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 FIBCD1Q8N539 461 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 SEPT1Q8WYJ6 367 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 CLP1Q92989 425 aaKnown RBP11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 PRRX2Q99811 253 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 GLT8D2Q9H1C3 349 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 CPVLQ9H3G5 476 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 SMARCAD1Q9H4L7 1026 aa11.12□□□□□ -0.63
TPM3P6-201ENST00000391998 COL4A6Q14031 1691 aa11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 DCXO43602 365 aa11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 HOXA13P31271 388 aaPredicted RBP11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 SSTR3P32745 418 aaPredicted RBP11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 BMPR1AP36894 532 aa11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 SLC26A2P50443 739 aa11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 ADAM17P78536 824 aa11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 SP2Q02086 613 aa11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 KRT40Q6A162 431 aa11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 CYFIP1Q7L576 1253 aa11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 FCHSD1Q86WN1 690 aa11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 HOMER1Q86YM7 354 aa11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.11□□□□□ -0.63
TPM3P6-201ENST00000391998 P2RX5Q93086 422 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms