RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 NPLOC4Q8TAT6 608 aa2.92□□□□□ -1.94
RNU6-239P-201ENST00000390990 KLHL6Q8WZ60 621 aa2.92□□□□□ -1.94
RNU6-239P-201ENST00000390990 APEX2Q9UBZ4 518 aa2.92□□□□□ -1.94
RNU6-239P-201ENST00000390990 FBXL7Q9UJT9 491 aa2.92□□□□□ -1.94
RNU6-239P-201ENST00000390990 AKT3Q9Y243 479 aa2.92□□□□□ -1.94
RNU6-239P-201ENST00000390990 SUGT1Q9Y2Z0 365 aa2.92□□□□□ -1.94
RNU6-239P-201ENST00000390990 PCDHB4Q9Y5E5 795 aa2.92□□□□□ -1.94
RNU6-239P-201ENST00000390990 TIMM13Q9Y5L4 95 aaPredicted RBP2.92□□□□□ -1.94
RNU6-239P-201ENST00000390990 ZNF888P0CJ79 500 aaPredicted RBP2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 RPL11P62913 178 aaKnown RBP2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 RBM10P98175 930 aaKnown RBP2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 SLC7A5Q01650 507 aa2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 STEAP3Q658P3 488 aa2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 GLCCI1Q86VQ1 547 aa2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 CCDC103Q8IW40 242 aa2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 DTX3Q8N9I9 347 aa2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 ZNF483Q8TF39 744 aaPredicted RBP2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 KATNBL1Q9H079 304 aa2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 HSPBP1Q9NZL4 362 aa2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 TIMELESSQ9UNS1 1208 aa2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 EMC9Q9Y3B6 208 aa2.91□□□□□ -1.94
RNU6-239P-201ENST00000390990 MAKP20794 623 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 BMP5P22003 454 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 ACRV1P26436 265 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 RAC3P60763 192 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 NOLC1Q14978 699 aaKnown RBP eCLIP2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 SMAD2Q15796 467 aaKnown RBP2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 CCDC142Q17RM4 750 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 RNF151Q2KHN1 245 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 EMC4Q5J8M3 183 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 POLNQ7Z5Q5 900 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 IFNL2Q8IZJ0 200 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 ZNF808Q8N4W9 903 aaPredicted RBP2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 CLIP3Q96DZ5 547 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 TMEM169Q96HH4 297 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 PHAXQ9H814 394 aaKnown RBP2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 SLC30A1Q9Y6M5 507 aa2.9□□□□□ -1.95
RNU6-239P-201ENST00000390990 A0A1W2PQH9 124 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 KRTAP29-1A8MX34 341 aaPredicted RBP2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 RAMP2O60895 175 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 CHGBP05060 677 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 CKMP06732 381 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 CR2P20023 1033 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 GLRBP48167 497 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 KRTAP10-11P60412 298 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 DUSP8Q13202 625 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 USP10Q14694 798 aaKnown RBP2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 CHRNA2Q15822 529 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 GTF2IRD2BQ6EKJ0 949 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 CCDC81Q6ZN84 652 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 SND1Q7KZF4 910 aaKnown RBP eCLIP2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 C14orf37Q86TY3 774 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 GTF2IRD2Q86UP8 949 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 ULK2Q8IYT8 1036 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 STPG3Q8N7X2 389 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 DPYSL5Q9BPU6 564 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 TTPALQ9BTX7 342 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 LGR4Q9BXB1 951 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 CYP26B1Q9NR63 512 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 SLC2A4RGQ9NR83 387 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 MYOTQ9UBF9 498 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 ZFP69BQ9UJL9 534 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 OAZ3Q9UMX2 235 aa2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 COA3Q9Y2R0 106 aaPredicted RBP2.89□□□□□ -1.95
RNU6-239P-201ENST00000390990 MATN2O00339 956 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 FOXN1O15353 648 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 FBLP22087 321 aaKnown RBP2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 GTF2A2P52657 109 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 GRIN1Q05586 938 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 SKIDA1Q1XH10 827 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 VASNQ6EMK4 673 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 IQCEQ6IPM2 695 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 REXO1L1PQ8IX06 675 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 RCBTB1Q8NDN9 531 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 CLEC4DQ8WXI8 215 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 DIO2Q92813 273 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 FAM89AQ96GI7 184 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 OR14A2Q96R54 314 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 PRRX2Q99811 253 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 PLA2G12BQ9BX93 195 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 ZNF703Q9H7S9 590 aaPredicted RBP2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 KCND1Q9NSA2 647 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 CEP72Q9P209 647 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 REXO2Q9Y3B8 237 aaKnown RBP2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 SLC12A7Q9Y666 1083 aa2.88□□□□□ -1.95
RNU6-239P-201ENST00000390990 ANKRD34BA5PLL1 514 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 H0Y858 1186 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 H7BY64 318 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 CDC14BO60729 498 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 FBXO21O94952 628 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 IL18BPO95998 194 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 LCP1P13796 627 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 HIBADHP31937 336 aaKnown RBP2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 GJA4P35212 333 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 ADRA1BP35368 520 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 ITGAEP38570 1179 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 FOXL1Q12952 345 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 E4F1Q66K89 784 aaPredicted RBP2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms