RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 DHX37Q8IY37 1157 aaKnown RBP19.51■□□□□ 0.71
SQSTM1-202ENST00000389805 CCDC13Q8IYE1 715 aa19.51■□□□□ 0.71
SQSTM1-202ENST00000389805 PPANQ9NQ55 473 aaKnown RBP19.51■□□□□ 0.71
SQSTM1-202ENST00000389805 ANO9A1A5B4 782 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 RAD21O60216 631 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 HSPA1LP34931 641 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 CARSP49589 748 aaKnown RBP19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 KCNB1Q14721 858 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 TTI2Q6NXR4 508 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 KIRREL3Q8IZU9 778 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 DUSP9Q99956 384 aaKnown RBP19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 ZNF233A6NK53 670 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 E7EVH7 732 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 MPHOSPH10O00566 681 aaKnown RBP19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 ELF1P32519 619 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 NOVP48745 357 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 NEDD9Q14511 834 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 CFAP58Q5T655 872 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 ANKRD40Q6AI12 368 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 CCT8L2Q96SF2 557 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 OSBPL9Q96SU4 736 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 NUDT12Q9BQG2 462 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 EPN3Q9H201 632 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 RBM12Q9NTZ6 932 aaKnown RBP19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 ATP6V0A2Q9Y487 856 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 POTEMA6NI47 508 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 PSMA7O14818 248 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 BACH1O14867 736 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 PPP1R11O60927 126 aaPredicted RBP19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 ALS2CLQ60I27 953 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 C8orf74Q6P047 294 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 KCTD1Q719H9 257 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 CSGALNACT2Q8N6G5 542 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 ZNF507Q8TCN5 953 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 CCDC42Q96M95 316 aa19.5■□□□□ 0.71
SQSTM1-202ENST00000389805 RASSF10A6NK89 507 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 NF2P35240 595 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 RNASE9P60153 205 aaKnown RBP19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 TBC1D8BQ0IIM8 1120 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 SLC39A2Q9NP94 309 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 SERPINB13Q9UIV8 391 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 ODF2LQ9ULJ1 636 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 KLRG2A4D1S0 409 aaPredicted RBP19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 EPB41P11171 864 aaKnown RBP19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 SPA17Q15506 151 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 CEP85LQ5SZL2 805 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 DYMQ7RTS9 669 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 COA1Q9GZY4 146 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 JMJD4Q9H9V9 463 aa19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 MAGEC2Q9UBF1 373 aaPredicted RBP19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.49■□□□□ 0.71
SQSTM1-202ENST00000389805 KIF1CO43896 1103 aaKnown RBP19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 TACC1O75410 805 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 ERCC3P19447 782 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 NR1D1P20393 614 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 TNNI2P48788 182 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 E2F5Q15329 346 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 CDC42EP5Q6NZY7 148 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 EMBQ6PCB8 327 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 MICALCLQ6ZW33 695 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 NLRP14Q86W24 1093 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 ADGRF4Q8IZF3 695 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 AK8Q96MA6 479 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 SCLT1Q96NL6 688 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 SLC40A1Q9NP59 571 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 GLI1P08151 1106 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 SHMT1P34896 483 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 VAV2P52735 878 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 TCP10Q12799 353 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 TRADDQ15628 312 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 CALCRLQ16602 461 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 MEA1Q16626 185 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 PTGISQ16647 500 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 MYCBPAPQ8TBZ2 947 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 CCDC114Q96M63 670 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 DBNDD1Q9H9R9 158 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 EXOC1Q9NV70 894 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 MCM8Q9UJA3 840 aa19.48■□□□□ 0.71
SQSTM1-202ENST00000389805 PPP1R37O75864 691 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 SRGNP10124 158 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 GRB10Q13322 594 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 SLC27A3Q5K4L6 730 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 MTMR9Q96QG7 549 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 TUBGCP2Q9BSJ2 902 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 IFIH1Q9BYX4 1025 aaKnown RBP19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 VCPKMTQ9H867 229 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 EPB41L5Q9HCM4 733 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 ADCY7P51828 1080 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 GUCY2DQ02846 1103 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 SPRED3Q2MJR0 410 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 RPAINQ86UA6 219 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 ZNF219Q9P2Y4 722 aaPredicted RBP19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 IGKV6D-41A0A0C4DH26 115 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 USP17L10C9JJH3 530 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 TTLL1O95922 423 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 CDR1P51861 262 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 KIAA0895Q8NCT3 520 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 TRIM58Q8NG06 486 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 BLOC1S4Q9NUP1 217 aa19.47■□□□□ 0.71
SQSTM1-202ENST00000389805 G3V3G9 751 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms