RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 CEP72Q9P209 647 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 ADD3Q9UEY8 706 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 CAPN11Q9UMQ6 739 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 MAPK4P31152 587 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 ELF1P32519 619 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 MDH1P40925 334 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 GFPT1Q06210 699 aaPredicted RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 CAPRIN2Q6IMN6 1127 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 TMTC3Q6ZXV5 915 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 KRT26Q7Z3Y9 468 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 HPCAL4Q9UM19 191 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 GRID2IPA4D2P6 1211 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 H7C1W4 665 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 ESRRAP11474 423 aaPredicted RBP9.37□□□□□ -0.91
PKP4-202ENST00000389759 YWHAGP61981 247 aaKnown RBP eCLIP9.37□□□□□ -0.91
PKP4-202ENST00000389759 DYNLL1P63167 89 aaKnown RBP9.37□□□□□ -0.91
PKP4-202ENST00000389759 PTK2Q05397 1052 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 NR1I3Q14994 352 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 BSPRYQ5W0U4 402 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 REXO1L1PQ8IX06 675 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 CARD10Q9BWT7 1032 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 THEGQ9P2T0 379 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 STOML1Q9UBI4 398 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.37□□□□□ -0.91
PKP4-202ENST00000389759 PCDHA1Q9Y5I3 950 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 CLIC2O15247 247 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 AP5Z1O43299 807 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 DCTN3O75935 186 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 ATP5HO75947 161 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 MCAMP43121 646 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 DBN1Q16643 649 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 USPL1Q5W0Q7 1092 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 UNC13DQ70J99 1090 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 TRIM42Q8IWZ5 723 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 TAB3Q8N5C8 712 aaPredicted RBP9.37□□□□□ -0.91
PKP4-202ENST00000389759 GNPATO15228 680 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 DLATP10515 647 aaKnown RBP9.37□□□□□ -0.91
PKP4-202ENST00000389759 MYCLP12524 364 aaPredicted RBP9.37□□□□□ -0.91
PKP4-202ENST00000389759 LTKP29376 864 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 MFAP3P55082 362 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 SNX16P57768 344 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 BPIFB4P59827 614 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 HDLBPQ00341 1268 aaKnown RBP9.37□□□□□ -0.91
PKP4-202ENST00000389759 FAM83BQ5T0W9 1011 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 RBM26Q5T8P6 1007 aaKnown RBP9.37□□□□□ -0.91
PKP4-202ENST00000389759 FAM47EQ6ZV65 393 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 MIER3Q7Z3K6 550 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 ZNF473Q8WTR7 871 aaKnown RBP9.37□□□□□ -0.91
PKP4-202ENST00000389759 NT5C1BQ96P26 610 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 FAM167BQ9BTA0 163 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 LY9Q9HBG7 655 aa9.37□□□□□ -0.91
PKP4-202ENST00000389759 LIMA1Q9UHB6 759 aaKnown RBP9.37□□□□□ -0.91
PKP4-202ENST00000389759 RCAN1P53805 252 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 PPP4R3CPQ6ZMV5 832 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 RHOT2Q8IXI1 618 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 CCT6BQ92526 530 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 THOC1Q96FV9 657 aaKnown RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 BTG4Q9NY30 223 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 KCNG1Q9UIX4 513 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 CFAP74Q9C0B2 1584 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 CYP2D7A0A087X1C5 515 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 ZNF185O15231 689 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 DAPK3O43293 454 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 FOSP01100 380 aaPredicted RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 LMNAP02545 664 aaKnown RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 GAP43P17677 238 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 GNPTABQ3T906 1256 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 MFSD14BQ5SR56 506 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 SGMS1Q86VZ5 419 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 MTA3Q9BTC8 594 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 DNAJC17Q9NVM6 304 aaKnown RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 ANGPTL2Q9UKU9 493 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 DIS3Q9Y2L1 958 aaKnown RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 MIF4GDA9UHW6 222 aaKnown RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 LSP1P33241 339 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 MSH2P43246 934 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 RASGRF1Q13972 1273 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 RBM43Q6ZSC3 357 aaKnown RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 ZC3H18Q86VM9 953 aaKnown RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 PROM2Q8N271 834 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 CCDC24Q8N4L8 307 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 GABPB2Q8TAK5 448 aaPredicted RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 FBXO2Q9UK22 296 aaPredicted RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 FBXL5Q9UKA1 691 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 SUFUQ9UMX1 484 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 NEDD4P46934 1319 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 ITIH6Q6UXX5 1313 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 CRCPO75575 148 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 MT-ND3P03897 115 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 SLC8A3P57103 927 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 SPARCL1Q14515 664 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 DPP8Q6V1X1 898 aaPredicted RBP9.36□□□□□ -0.91
PKP4-202ENST00000389759 CPXCR1Q8N123 301 aa9.36□□□□□ -0.91
PKP4-202ENST00000389759 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.36□□□□□ -0.912e-7■■■■■ 64.2
PKP4-202ENST00000389759 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.36□□□□□ -0.913e-6■■□□□ 12.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms