RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 RPS12P25398 132 aaKnown RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 PRELPP51888 382 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 ANGEL2Q5VTE6 544 aaKnown RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 CASC4Q6P4E1 433 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 RSRC2Q7L4I2 434 aaKnown RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 CD2BP2O95400 341 aaKnown RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 GTF2F1P35269 517 aaKnown RBP eCLIP11.22□□□□□ -0.612e-13■■■□□ 16.7
PKP4-201ENST00000389757 GMPSP49915 693 aaPredicted RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 ARHGAP4P98171 946 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 LONRF2Q1L5Z9 754 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 CFAP157Q5JU67 520 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 SLFN12LQ6IEE8 588 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 MCPH1Q8NEM0 835 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 TRIM58Q8NG06 486 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 TBC1D31Q96DN5 1066 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 PPANQ9NQ55 473 aaKnown RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 GGA3Q9NZ52 723 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 OSTNP61366 133 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 TOB2Q14106 344 aaPredicted RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 ADGRF4Q8IZF3 695 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 ZFP91Q96JP5 570 aaPredicted RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 FAM20AQ96MK3 541 aa11.22□□□□□ -0.61
PKP4-201ENST00000389757 RPF1Q9H9Y2 349 aaKnown RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 BZW2Q9Y6E2 419 aaKnown RBP11.22□□□□□ -0.61
PKP4-201ENST00000389757 MST1RQ04912 1400 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 GOLGA6CA6NDK9 693 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 GOLGA6BA6NDN3 693 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 GOLGA6DP0CG33 693 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 GRAMD1CQ8IYS0 662 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 RSAD2Q8WXG1 361 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 ZMYND15Q9H091 742 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 ATP6V0A4Q9HBG4 840 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 GOLGA6AQ9NYA3 693 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 FLT1P17948 1338 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 MTMR2Q13614 643 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 MAN2A1Q16706 1144 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 GSDMBQ8TAX9 411 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 HAUS1Q96CS2 278 aa11.21□□□□□ -0.61
PKP4-201ENST00000389757 TNPO2O14787 897 aaKnown RBP11.21□□□□□ -0.62
PKP4-201ENST00000389757 SMYD4Q8IYR2 804 aaPredicted RBP11.21□□□□□ -0.62
PKP4-201ENST00000389757 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.21□□□□□ -0.62
PKP4-201ENST00000389757 FBF1Q8TES7 1133 aa11.21□□□□□ -0.62
PKP4-201ENST00000389757 ERO1AQ96HE7 468 aa11.21□□□□□ -0.62
PKP4-201ENST00000389757 TRIM7Q9C029 511 aa11.21□□□□□ -0.62
PKP4-201ENST00000389757 CEMIPQ8WUJ3 1361 aa11.21□□□□□ -0.62
PKP4-201ENST00000389757 PPM1EQ8WY54 764 aa11.21□□□□□ -0.62
PKP4-201ENST00000389757 MRRFQ96E11 262 aaKnown RBP11.21□□□□□ -0.62
PKP4-201ENST00000389757 EPSTI1Q96J88 318 aa11.21□□□□□ -0.62
PKP4-201ENST00000389757 MSTO1Q9BUK6 570 aa11.21□□□□□ -0.62
PKP4-201ENST00000389757 ASB14A6NK59 587 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 SFNP31947 248 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 DDIT3P35638 169 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 PEX3P56589 373 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 GEN1Q17RS7 908 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 CDC42EP5Q6NZY7 148 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 INTS5Q6P9B9 1019 aaKnown RBP11.2□□□□□ -0.62
PKP4-201ENST00000389757 TAOK1Q7L7X3 1001 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 CCT6BQ92526 530 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 ZNF512BQ96KM6 892 aaPredicted RBP11.2□□□□□ -0.62
PKP4-201ENST00000389757 NXF1Q9UBU9 619 aaKnown RBP11.2□□□□□ -0.62
PKP4-201ENST00000389757 C19orf81C9J6K1 198 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 THAP12O43422 761 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 COBLO75128 1261 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 CRCPO75575 148 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 LMNB1P20700 586 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 COG2Q14746 738 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 TAF1CQ15572 869 aaPredicted RBP11.2□□□□□ -0.62
PKP4-201ENST00000389757 HDXQ7Z353 690 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 COL23A1Q86Y22 540 aaPredicted RBP11.2□□□□□ -0.62
PKP4-201ENST00000389757 FAM151AQ8WW52 585 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 PHLPP2Q6ZVD8 1323 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 SYNJ2BP-COX16A0A087WUM0 186 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 CCNE1P24864 410 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 MXI1P50539 228 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 ANKS4BQ8N8V4 417 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 NEK9Q8TD19 979 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 GPT2Q8TD30 523 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 LPAR1Q92633 364 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 FAM149B1Q96BN6 582 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 ZBED2Q9BTP6 218 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 BARHL2Q9NY43 387 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 COX16Q9P0S2 106 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 ATP8B3O60423 1300 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 IFNB1P01574 187 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 IRX5P78411 483 aaPredicted RBP11.2□□□□□ -0.62
PKP4-201ENST00000389757 LGSNQ5TDP6 509 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 BSPRYQ5W0U4 402 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 MRFAP1L1Q96HT8 127 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 SMC6Q96SB8 1091 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 MTFR1LQ9H019 292 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 MAN1B1Q9UKM7 699 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 TYW5A2RUC4 315 aaKnown RBP11.2□□□□□ -0.62
PKP4-201ENST00000389757 ATP2C2O75185 946 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 ZNF157P51786 506 aaPredicted RBP11.2□□□□□ -0.62
PKP4-201ENST00000389757 ARPP19P56211 112 aa11.2□□□□□ -0.62
PKP4-201ENST00000389757 SARNPP82979 210 aaKnown RBP11.2□□□□□ -0.62
PKP4-201ENST00000389757 SNAPC2Q13487 334 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms