RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 CCDC125Q86Z20 511 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 DHTKD1Q96HY7 919 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 LACRTQ9GZZ8 138 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 USO1O60763 962 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 ENTPD3O75355 529 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 ECE1P42892 770 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 PSEN1P49768 467 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 PRELPP51888 382 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 ASPRV1Q53RT3 343 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 HERC4Q5GLZ8 1057 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 TCERG1LQ5VWI1 586 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 SLFN13Q68D06 897 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 CIAPIN1Q6FI81 312 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 TTI2Q6NXR4 508 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 BANK1Q8NDB2 785 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 GLIS3Q8NEA6 775 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 THAP9Q9H5L6 903 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 PSTPIP2Q9H939 334 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 DDX25Q9UHL0 483 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 ZNF646O15015 1829 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 A0A1W2PRG0 241 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 CCDC151A5D8V7 595 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 MYMKA6NI61 221 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 WNT10BO00744 389 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 BUB1O43683 1085 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 KLRC4O43908 158 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 GRIPAP1Q4V328 841 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 DDX12PQ92771 950 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 FAM212AQ96EL1 285 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 IFIH1Q9BYX4 1025 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 PCDHA12Q9UN75 941 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 ASTN2O75129 1339 aaPredicted RBP13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 F5H6K3 240 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 KLRC3Q07444 240 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 ZYXQ15942 572 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 CCDC70Q6NSX1 233 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 RSRC2Q7L4I2 434 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 HDXQ7Z353 690 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 AK8Q96MA6 479 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 KIAA1024Q9UPX6 916 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 ITIH6Q6UXX5 1313 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 LAD1O00515 517 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 ZRANB2O95218 330 aaKnown RBP eCLIP13.38□□□□□ -0.273e-12■■■□□ 16.4
CAPRIN1-202ENST00000389645 ZNF76P36508 570 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 ACER1Q8TDN7 264 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 DUSP9Q99956 384 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 SIPA1L1O43166 1804 aa13.38□□□□□ -0.27
CAPRIN1-202ENST00000389645 CNTNAP1P78357 1384 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 MYO3BQ8WXR4 1341 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 MEIS1O00470 390 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 N4BP1O75113 896 aaKnown RBP13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 MRPL12P52815 198 aaKnown RBP13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 SLC20A2Q08357 652 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 RASSF4Q9H2L5 321 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 E9PMD0 336 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 ARHGAP25P42331 645 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 KCNB1Q14721 858 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 BRD3Q15059 726 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 WHAMMP3Q1A5X7 153 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 TMEM179Q6ZVK1 233 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 NDST4Q9H3R1 872 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 MLXIPQ9HAP2 919 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 CYP4A11Q02928 519 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 KIAA0895Q8NCT3 520 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 CUL5Q93034 780 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 MMS19Q96T76 1030 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 ANKZF1Q9H8Y5 726 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 SMARCAL1Q9NZC9 954 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 CAPN11Q9UMQ6 739 aa13.37□□□□□ -0.27
CAPRIN1-202ENST00000389645 NPHP3-ACAD11A0A0J9YXS1 232 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 MOCS3O95396 460 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 EIF4A3P38919 411 aaKnown RBP13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 STAT3P40763 770 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 MAGEA1P43355 309 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 C2orf54Q08AI8 447 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 TBC1D10BQ4KMP7 808 aaPredicted RBP13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 FAM151AQ8WW52 585 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 SGIP1Q9BQI5 828 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 FUT8Q9BYC5 575 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 GBP3Q9H0R5 595 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 MYOZ2Q9NPC6 264 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 REXO2Q9Y3B8 237 aaKnown RBP13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 PCDHA1Q9Y5I3 950 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 NDUFB10O96000 172 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 PTGER2P43116 358 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 ZBED6P86452 979 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 RAPGEF1Q13905 1077 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 PRR16Q569H4 304 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 KIAA1755Q5JYT7 1200 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 KCNK18Q7Z418 384 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 SEMA6BQ9H3T3 888 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 RABEP2Q9H5N1 569 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 NYAP2Q9P242 653 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 MYH4Q9Y623 1939 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms