RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 RABGGTAQ92696 567 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 SLC12A6Q9UHW9 1150 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 HIP1RO75146 1068 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 SEPT2Q15019 361 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 FAM186BQ8IYM0 893 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 KCTD6Q8NC69 237 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 QTRT2Q9H974 415 aaKnown RBP13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 ZBTB1Q9Y2K1 713 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 HOXA7P31268 230 aaPredicted RBP13.33□□□□□ -0.27
KCNQ3-201ENST00000388996 SPATA31E1Q6ZUB1 1445 aa13.33□□□□□ -0.27
KCNQ3-201ENST00000388996 ERVV-1B6SEH8 477 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 P2RX5Q93086 422 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 MYH8P13535 1937 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 RAD17O75943 681 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 SLC4A1P02730 911 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 APBA1Q02410 837 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 LRRC8AQ8IWT6 810 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 LRRC8CQ8TDW0 803 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 C10orf76Q5T2E6 689 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 EEF2KMTQ96G04 330 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 ZNF341Q9BYN7 854 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 PLCG1P19174 1290 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 IL9RQ01113 521 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 PARVGQ9HBI0 331 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 TLR7Q9NYK1 1049 aaKnown RBP13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 RWDD2AQ9UIY3 292 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 KRT1P04264 644 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 UBXN2AP68543 259 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 SPZ1Q9BXG8 430 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 PKP1Q13835 747 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 MAN2A1Q16706 1144 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 KSR1Q8IVT5 923 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 NSUN7Q8NE18 718 aaKnown RBP13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 JRKLQ9Y4A0 524 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 GOLGA8SH3BPF8 625 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 BMP3P12645 472 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 RFC1P35251 1148 aaPredicted RBP13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 RASGRP4Q8TDF6 673 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 FAM149B1Q96BN6 582 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 A2ML1A8K2U0 1454 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 PPP6R2O75170 966 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 SUN1O94901 812 aa13.33□□□□□ -0.28
KCNQ3-201ENST00000388996 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 BCL2L12Q9HB09 334 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 PMLP29590 882 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 SERPINB6P35237 376 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 PIGSQ96S52 555 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 PDE11AQ9HCR9 933 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 RPAP1Q9BWH6 1393 aaPredicted RBP13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 ARHGAP31Q2M1Z3 1444 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 ADD2P35612 726 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 MXI1P50539 228 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 ETF1P62495 437 aaKnown RBP13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 NAA35Q5VZE5 725 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 SMYD4Q8IYR2 804 aaPredicted RBP13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 LCORLQ8N3X6 602 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 STMN1P16949 149 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 SGO2Q562F6 1265 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 DCAF4Q8WV16 495 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 EPS15L1Q9UBC2 864 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 RASGRF1Q13972 1273 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 TRIM42Q8IWZ5 723 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 CAPN7Q9Y6W3 813 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 GFPT2O94808 682 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 ECEL1O95672 775 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 TRIM68Q6AZZ1 485 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 TBCKQ8TEA7 893 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 DBNDD1Q9H9R9 158 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 USP17L3A6NCW0 530 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 USP17L4A6NCW7 530 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 COBLO75128 1261 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 SLC16A2P36021 539 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 USP17L1Q7RTZ2 530 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 PARD3BQ8TEW8 1205 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 PPP1R13BQ96KQ4 1090 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 PI4KBQ9UBF8 816 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 USP17L8P0C7I0 530 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 KPNA2P52292 529 aaKnown RBP13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 ARMC9Q7Z3E5 817 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 KRT27Q7Z3Y8 459 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 TMEM206Q9H813 350 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 ANGPTL3Q9Y5C1 460 aa13.32□□□□□ -0.28
KCNQ3-201ENST00000388996 AFDNP55196 1824 aaKnown RBP13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 ZSCAN26Q16670 478 aa13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 CLGNO14967 610 aa13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 PRPSAP2O60256 369 aa13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 MECOMQ03112 1051 aa13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 FAM8A1Q9UBU6 413 aa13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 CASP2P42575 452 aa13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 FKBP3Q00688 224 aaKnown RBP13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 TDRD7Q8NHU6 1098 aaKnown RBP13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 LRGUKQ96M69 825 aa13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 MMP1P03956 469 aa13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 TBC1D10BQ4KMP7 808 aaPredicted RBP13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
KCNQ3-201ENST00000388996 PLEKHF1Q96S99 279 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms