RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PCDHB4Q9Y5E5 795 aa1.06□□□□□ -2.24
SNORD28-201ENST00000384706 PCDHGB7Q9Y5F8 929 aa1.06□□□□□ -2.24
SNORD28-201ENST00000384706 PCDHA2Q9Y5H9 948 aa1.06□□□□□ -2.24
SNORD28-201ENST00000384706 TNFRSF18Q9Y5U5 241 aa1.06□□□□□ -2.24
SNORD28-201ENST00000384706 SLC12A7Q9Y666 1083 aa1.06□□□□□ -2.24
SNORD28-201ENST00000384706 X6R8D5 127 aa1.06□□□□□ -2.24
SNORD28-201ENST00000384706 ANKRD34BA5PLL1 514 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 ARNTLO00327 626 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 MAFKO60675 156 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 RAMP2O60895 175 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 TADA3O75528 432 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 ADH4P08319 380 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 SNRPB2P08579 225 aaKnown RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 ZNF888P0CJ79 500 aaPredicted RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 COL6A1P12109 1028 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 LCP1P13796 627 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 CR2P20023 1033 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 HIBADHP31937 336 aaKnown RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 KCNJ6P48051 423 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 GTF2A2P52657 109 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 EIF6P56537 245 aaKnown RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 RAC3P60763 192 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 RBM10P98175 930 aaKnown RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 PURAQ00577 322 aaKnown RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 GRIN1Q05586 938 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 LSAMPQ13449 338 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 TUBA3CQ13748 450 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 SMAD2Q15796 467 aaKnown RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 KRTAP15-1Q3LI76 137 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 ZNF568Q3ZCX4 644 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 ZNF394Q53GI3 561 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 ZNF326Q5BKZ1 582 aaKnown RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 GTF2IRD2BQ6EKJ0 949 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 VASNQ6EMK4 673 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 TUBA3EQ6PEY2 450 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 VHLLQ6RSH7 139 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 Q6ZSN1 163 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 MRGPRGQ86SM5 289 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 GTF2IRD2Q86UP8 949 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 NLRP10Q86W26 655 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 CCDC103Q8IW40 242 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 RBM12BQ8IXT5 1001 aaKnown RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 CRACR2BQ8N4Y2 399 aaPredicted RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 AMER2Q8N7J2 671 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 STPG3Q8N7X2 389 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 RCBTB1Q8NDN9 531 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 IL17DQ8TAD2 202 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 GIPC2Q8TF65 315 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 CPLX3Q8WVH0 158 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 BTN2A2Q8WVV5 523 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 CLEC4DQ8WXI8 215 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 KLHL6Q8WZ60 621 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 LARP4BQ92615 738 aaKnown RBP1.05□□□□□ -2.24
SNORD28-201ENST00000384706 EDAQ92838 391 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 CLIP3Q96DZ5 547 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 OR14A2Q96R54 314 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 WRNIP1Q96S55 665 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 TRAIPQ9BWF2 469 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 JAM3Q9BX67 310 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 BCL2L13Q9BXK5 485 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 BCL11AQ9H165 835 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 NKX2-4Q9H2Z4 354 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 SMOC1Q9H4F8 434 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 SEC61A2Q9H9S3 476 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 DLL4Q9NR61 685 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 SLC2A4RGQ9NR83 387 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 GINM1Q9NU53 330 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 CLDND1Q9NY35 253 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 ARHGAP20Q9P2F6 1191 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 LRP2BPQ9P2M1 347 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 MYOTQ9UBF9 498 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 APEX2Q9UBZ4 518 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 ZFP69BQ9UJL9 534 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 FBXL7Q9UJT9 491 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 ZNF652Q9Y2D9 606 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 EFR3BQ9Y2G0 817 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 PTPN22Q9Y2R2 807 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 EMC9Q9Y3B6 208 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 DMRT1Q9Y5R6 373 aa1.05□□□□□ -2.24
SNORD28-201ENST00000384706 ESYT3A0FGR9 886 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 H0Y858 1186 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 H7BY64 318 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 KRIT1O00522 736 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 SLC27A2O14975 620 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 U2SURPO15042 1029 aaKnown RBP1.04□□□□□ -2.24
SNORD28-201ENST00000384706 MEFVO15553 781 aaPredicted RBP1.04□□□□□ -2.24
SNORD28-201ENST00000384706 TBX1O43435 398 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 CDC14BO60729 498 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 KNG1P01042 644 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 LTFP02788 710 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 ITGAVP06756 1048 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 ENO2P09104 434 aaPredicted RBP1.04□□□□□ -2.24
SNORD28-201ENST00000384706 ERCC3P19447 782 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 MAKP20794 623 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 BMP5P22003 454 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 HOXC12P31275 282 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 CSF2RBP32927 897 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 ZNF76P36508 570 aa1.04□□□□□ -2.24
SNORD28-201ENST00000384706 LTBRP36941 435 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms