RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 KRT79Q5XKE5 535 aa15.35■□□□□ 0.05
NEK4-202ENST00000383721 MICALL2Q8IY33 904 aa15.35■□□□□ 0.05
NEK4-202ENST00000383721 RAB34Q9BZG1 259 aa15.35■□□□□ 0.05
NEK4-202ENST00000383721 MLXIPQ9HAP2 919 aa15.35■□□□□ 0.05
NEK4-202ENST00000383721 SNX12Q9UMY4 172 aa15.35■□□□□ 0.05
NEK4-202ENST00000383721 MYO3BQ8WXR4 1341 aa15.35■□□□□ 0.05
NEK4-202ENST00000383721 LRRC53A6NM62 1247 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 PPP1R11O60927 126 aaPredicted RBP15.34■□□□□ 0.05
NEK4-202ENST00000383721 ERCC3P19447 782 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 PICALMQ13492 652 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 UBE2SQ16763 222 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 CCDC84Q86UT8 332 aaPredicted RBP15.34■□□□□ 0.05
NEK4-202ENST00000383721 CREG2Q8IUH2 290 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 GPIHBP1Q8IV16 184 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 TRIM58Q8NG06 486 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 BAP1Q92560 729 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 ACBD3Q9H3P7 528 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 JMJD4Q9H9V9 463 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 MED4Q9NPJ6 270 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 CNOT7Q9UIV1 285 aaKnown RBP15.34■□□□□ 0.05
NEK4-202ENST00000383721 SUGT1Q9Y2Z0 365 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 JRKLQ9Y4A0 524 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 USO1O60763 962 aaKnown RBP15.34■□□□□ 0.05
NEK4-202ENST00000383721 FGFR1OPO95684 399 aaKnown RBP15.34■□□□□ 0.05
NEK4-202ENST00000383721 MYBL2P10244 700 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 EPS15P42566 896 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 CRKP46108 304 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 AARSP49588 968 aaKnown RBP eCLIP15.34■□□□□ 0.05
NEK4-202ENST00000383721 RBM5P52756 815 aaKnown RBP eCLIP15.34■□□□□ 0.05
NEK4-202ENST00000383721 ATP2B2Q01814 1243 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 C2orf54Q08AI8 447 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 RBM26Q5T8P6 1007 aaKnown RBP15.34■□□□□ 0.05
NEK4-202ENST00000383721 RRAGAQ7L523 313 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 SAMD7Q7Z3H4 446 aa15.34■□□□□ 0.05
NEK4-202ENST00000383721 ZC3H4Q9UPT8 1303 aaKnown RBP15.34■□□□□ 0.05
NEK4-202ENST00000383721 MOCS3O95396 460 aa15.33■□□□□ 0.05
NEK4-202ENST00000383721 TNNT3P45378 269 aaPredicted RBP15.33■□□□□ 0.05
NEK4-202ENST00000383721 MAP9Q49MG5 647 aa15.33■□□□□ 0.05
NEK4-202ENST00000383721 PPP4R3AQ6IN85 833 aa15.33■□□□□ 0.05
NEK4-202ENST00000383721 CCDC155Q8N6L0 562 aa15.33■□□□□ 0.05
NEK4-202ENST00000383721 GOLGA5Q8TBA6 731 aa15.33■□□□□ 0.05
NEK4-202ENST00000383721 HAS1Q92839 578 aa15.33■□□□□ 0.05
NEK4-202ENST00000383721 GJA10Q969M2 543 aa15.33■□□□□ 0.05
NEK4-202ENST00000383721 RIC8AQ9NPQ8 531 aa15.33■□□□□ 0.05
NEK4-202ENST00000383721 HPCAL4Q9UM19 191 aa15.33■□□□□ 0.05
NEK4-202ENST00000383721 GLTPD2A6NH11 291 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 TULP2O00295 520 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 TACC1O75410 805 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 SYF2O95926 243 aaKnown RBP15.33■□□□□ 0.04
NEK4-202ENST00000383721 ACTN2P35609 894 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 CLK2P49760 499 aaKnown RBP15.33■□□□□ 0.04
NEK4-202ENST00000383721 ZNF543Q08ER8 600 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 PSMD2Q13200 908 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 DPY19L2Q6NUT2 758 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 CCNI2Q6ZMN8 369 aaPredicted RBP15.33■□□□□ 0.04
NEK4-202ENST00000383721 GSPT2Q8IYD1 628 aaKnown RBP15.33■□□□□ 0.04
NEK4-202ENST00000383721 ADGRF4Q8IZF3 695 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 COG1Q8WTW3 980 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 TEKT1Q969V4 418 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 DNAJC19Q96DA6 116 aa15.33■□□□□ 0.04
NEK4-202ENST00000383721 PNMA6FA0A0J9YX94 578 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 AKR1B10O60218 316 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 RPS12P25398 132 aaKnown RBP15.32■□□□□ 0.04
NEK4-202ENST00000383721 TTBK2Q6IQ55 1244 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 OGFOD1Q8N543 542 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 DRC1Q96MC2 740 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 GDAP1L1Q96MZ0 367 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 DEF6Q9H4E7 631 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 DDX4Q9NQI0 724 aaKnown RBP15.32■□□□□ 0.04
NEK4-202ENST00000383721 GPRC5DQ9NZD1 345 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 CAPN2P17655 700 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 KCNMA1Q12791 1236 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 ASTE1Q2TB18 679 aaPredicted RBP15.32■□□□□ 0.04
NEK4-202ENST00000383721 TBC1D10BQ4KMP7 808 aaPredicted RBP15.32■□□□□ 0.04
NEK4-202ENST00000383721 ZCWPW2Q504Y3 356 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 APOBEC3HQ6NTF7 200 aaKnown RBP15.32■□□□□ 0.04
NEK4-202ENST00000383721 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
NEK4-202ENST00000383721 LRRC27Q9C0I9 530 aa15.32■□□□□ 0.04
NEK4-202ENST00000383721 DDX25Q9UHL0 483 aaKnown RBP15.32■□□□□ 0.04
NEK4-202ENST00000383721 RAD51AP2Q09MP3 1159 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 COASYQ13057 564 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 PPP1R18Q6NYC8 613 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 PDXDC1Q6P996 788 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 FOXR2Q6PJQ5 311 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 MYOCDQ8IZQ8 938 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 ZNF526Q8TF50 670 aaPredicted RBP15.31■□□□□ 0.04
NEK4-202ENST00000383721 TSG101Q99816 390 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 MYOZ2Q9NPC6 264 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 SALL4Q9UJQ4 1053 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 RNF40O75150 1001 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 PRPF6O94906 941 aaKnown RBP15.31■□□□□ 0.04
NEK4-202ENST00000383721 TTLL1O95922 423 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 PRLRP16471 622 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 MAGEA1P43355 309 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 ZNF280AP59817 542 aaPredicted RBP15.31■□□□□ 0.04
NEK4-202ENST00000383721 NBPF9Q3BBW0 867 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 IQCEQ6IPM2 695 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 ZNF572Q7Z3I7 529 aaPredicted RBP15.31■□□□□ 0.04
NEK4-202ENST00000383721 MMGT1Q8N4V1 131 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms