RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 BTBD11A6QL63 1104 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 PRLRP16471 622 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 ZNF131P52739 623 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 DDX50Q9BQ39 737 aaKnown RBP16.39■□□□□ 0.21
VLDLR-202ENST00000382099 RNPEPL1Q9HAU8 725 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 A0A0G2JS52 829 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 SUN1O94901 812 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 EIF4A3P38919 411 aaKnown RBP16.39■□□□□ 0.21
VLDLR-202ENST00000382099 KIF11P52732 1056 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 TDRD12Q587J7 1177 aaKnown RBP16.39■□□□□ 0.21
VLDLR-202ENST00000382099 HOOK3Q86VS8 718 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 NCOA7Q8NI08 942 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 WDR66Q8TBY9 1149 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 TAF4BQ92750 862 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 ZNF317Q96PQ6 595 aaPredicted RBP16.39■□□□□ 0.21
VLDLR-202ENST00000382099 KRT23Q9C075 422 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 MLXIPLQ9NP71 852 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 FGFR1OP2Q9NVK5 253 aa16.39■□□□□ 0.21
VLDLR-202ENST00000382099 LGALS16A8MUM7 142 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 UBTFL6P0CB48 400 aaPredicted RBP16.38■□□□□ 0.21
VLDLR-202ENST00000382099 ZCCHC18P0CG32 403 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 CCNFP41002 786 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 TNNI3KQ59H18 835 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 FOXB2Q5VYV0 432 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 PIGWQ7Z7B1 504 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 SYMPKQ92797 1274 aaKnown RBP16.38■□□□□ 0.21
VLDLR-202ENST00000382099 RAB3IPQ96QF0 476 aaPredicted RBP16.38■□□□□ 0.21
VLDLR-202ENST00000382099 PURBQ96QR8 312 aaKnown RBP16.38■□□□□ 0.21
VLDLR-202ENST00000382099 AP1M1Q9BXS5 423 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 FPGT-TNNI3KV9GXZ4 949 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 LRRC10BA6NIK2 292 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 GOLGA8AA7E2F4 631 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 H0YGN5 161 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 GRM8O00222 908 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 ABLIM1O14639 778 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 PTDSS1P48651 473 aaKnown RBP16.38■□□□□ 0.21
VLDLR-202ENST00000382099 TOB1P50616 345 aaPredicted RBP16.38■□□□□ 0.21
VLDLR-202ENST00000382099 TMED1Q13445 227 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 MTMR3Q13615 1198 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 HIC2Q96JB3 615 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 TRAPPC9Q96Q05 1148 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 RWDD2AQ9UIY3 292 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 ZNF510Q9Y2H8 683 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 NFS1Q9Y697 457 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 MTIF2P46199 727 aaKnown RBP16.38■□□□□ 0.21
VLDLR-202ENST00000382099 SLCO1A2P46721 670 aa16.38■□□□□ 0.21
VLDLR-202ENST00000382099 ZNF572Q7Z3I7 529 aaPredicted RBP16.38■□□□□ 0.21
VLDLR-202ENST00000382099 PAIP2BQ9ULR5 123 aaKnown RBP16.38■□□□□ 0.21
VLDLR-202ENST00000382099 USP15Q9Y4E8 981 aaPredicted RBP16.38■□□□□ 0.21
VLDLR-202ENST00000382099 RFX7Q2KHR2 1363 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 DAPK3O43293 454 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 GJA8P48165 433 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 CBX3Q13185 183 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 SFMBT2Q5VUG0 894 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 SPATA20Q8TB22 786 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 ANKRD27Q96NW4 1050 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 NEUROG2Q9H2A3 272 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 FAM207AQ9NSI2 230 aaPredicted RBP16.37■□□□□ 0.21
VLDLR-202ENST00000382099 SALL4Q9UJQ4 1053 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 OR52E8Q6IFG1 317 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 RINLQ6ZS11 566 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 VSIG1Q86XK7 387 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 PIGOQ8TEQ8 1089 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 STK32AQ8WU08 396 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 MTMR8Q96EF0 704 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 ISCUQ9H1K1 167 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 CCDC87Q9NVE4 849 aa16.37■□□□□ 0.21
VLDLR-202ENST00000382099 SRPRBQ9Y5M8 271 aaKnown RBP16.37■□□□□ 0.21
VLDLR-202ENST00000382099 NVLO15381 856 aaKnown RBP16.36■□□□□ 0.21
VLDLR-202ENST00000382099 ATP9AO75110 1047 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 SSRP1Q08945 709 aaKnown RBP16.36■□□□□ 0.21
VLDLR-202ENST00000382099 KBTBD12Q3ZCT8 623 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 ARHGEF3Q9NR81 526 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 PAG1Q9NWQ8 432 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 WDR17Q8IZU2 1322 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 SH3TC1Q8TE82 1336 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 LTN1O94822 1766 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 RGS16O15492 202 aaPredicted RBP16.36■□□□□ 0.21
VLDLR-202ENST00000382099 TMCC1O94876 653 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 PDE6CP51160 858 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 RILPL1Q5EBL4 403 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 KLHDC7AQ5VTJ3 777 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 SUPT20HQ8NEM7 779 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 KAZALD1Q96I82 304 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 EXOC1Q9NV70 894 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 ATP5J2-PTCD1G3V325 749 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 KCNK3O14649 394 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 CEP104O60308 925 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 SNX3O60493 162 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
VLDLR-202ENST00000382099 PALMO75781 387 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 ZNF24P17028 368 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 DNM2P50570 870 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 MEA1Q16626 185 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 FERMT2Q96AC1 680 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 DYDC2Q96IM9 177 aa16.36■□□□□ 0.21
VLDLR-202ENST00000382099 DDX47Q9H0S4 455 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms