RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 USP17L18D6R9N7 530 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 USP17L22D6RA61 530 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 USP17L17D6RBQ6 530 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 USP17L19D6RCP7 530 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 USP17L20D6RJB6 530 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 RAD21O60216 631 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 TCP1P17987 556 aaKnown RBP13.17□□□□□ -0.3
TRIM23-203ENST00000381018 CYP3A7P24462 503 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 SLC1A4P43007 532 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 CRKP46108 304 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 AARSP49588 968 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM23-203ENST00000381018 MARSP56192 900 aaKnown RBP13.17□□□□□ -0.3
TRIM23-203ENST00000381018 C2orf54Q08AI8 447 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 USP17L24Q0WX57 530 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 NFIAQ12857 509 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 CDC37Q16543 378 aaPredicted RBP13.17□□□□□ -0.3
TRIM23-203ENST00000381018 ASTE1Q2TB18 679 aaPredicted RBP13.17□□□□□ -0.3
TRIM23-203ENST00000381018 SLC9C1Q4G0N8 1177 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 TDRD12Q587J7 1177 aaKnown RBP13.17□□□□□ -0.3
TRIM23-203ENST00000381018 USP17L6PQ6QN14 398 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 POTEBQ6S5H4 581 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 CREG2Q8IUH2 290 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 MMGT1Q8N4V1 131 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 RUBCNQ92622 972 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 MKL1Q969V6 931 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 TMX4Q9H1E5 349 aaPredicted RBP13.17□□□□□ -0.3
TRIM23-203ENST00000381018 DHX36Q9H2U1 1008 aaKnown RBP13.17□□□□□ -0.3
TRIM23-203ENST00000381018 TBC1D7Q9P0N9 293 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 PCDHA2Q9Y5H9 948 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 PITPNM2Q9BZ72 1349 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 RBAK-RBAKDNI3L0D1 243 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 SERPING1P05155 500 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 CYP11B2P19099 503 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 GFPT1Q06210 699 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 HERC4Q5GLZ8 1057 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 SFMBT2Q5VUG0 894 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 HGSNATQ68CP4 663 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 HAUS3Q68CZ6 603 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 MCTP2Q6DN12 878 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 TRIM59Q8IWR1 403 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 NELFCDQ8IXH7 590 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 CCDC155Q8N6L0 562 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 DRC1Q96MC2 740 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 ZDHHC15Q96MV8 337 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 MBOAT7Q96N66 472 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 NOX5Q96PH1 765 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 OSBPL9Q96SU4 736 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 LSM14BQ9BX40 385 aaKnown RBP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 DNAJC18Q9H819 358 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 NLRC4Q9NPP4 1024 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 NYAP2Q9P242 653 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 FAM184BQ9ULE4 1060 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 BRWD3Q6RI45 1802 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 ZNF646O15015 1829 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 KRT18P05783 430 aaKnown RBP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 ALDH1B1P30837 517 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 CERKLQ49MI3 558 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 CCNI2Q6ZMN8 369 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 ZFPM1Q8IX07 1006 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 COG1Q8WTW3 980 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 FGFBP2Q9BYJ0 223 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 KCTD10Q9H3F6 313 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 TRPC5Q9UL62 973 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-203ENST00000381018 HPCAL4Q9UM19 191 aa13.16□□□□□ -0.3
TRIM23-203ENST00000381018 SCN9AQ15858 1988 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 NPHP3-ACAD11A0A0J9YXS1 232 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
TRIM23-203ENST00000381018 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 MED24O75448 989 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 NOL4O94818 638 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 EPS15P42566 896 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 SLC12A3P55017 1021 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 POLR2FP61218 127 aaKnown RBP13.15□□□□□ -0.3
TRIM23-203ENST00000381018 EDRF1Q3B7T1 1238 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 CCDC181Q5TID7 509 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 NFRKBQ6P4R8 1299 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 GPIHBP1Q8IV16 184 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 ZC3H3Q8IXZ2 948 aaKnown RBP13.15□□□□□ -0.3
TRIM23-203ENST00000381018 RNF10Q8N5U6 811 aaKnown RBP13.15□□□□□ -0.3
TRIM23-203ENST00000381018 ERMNQ8TAM6 284 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 GOLGA5Q8TBA6 731 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 SCFD1Q8WVM8 642 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 UIMC1Q96RL1 719 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 TRIM34Q9BYJ4 488 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 TSKSQ9UJT2 592 aa13.15□□□□□ -0.3
TRIM23-203ENST00000381018 POTEFA5A3E0 1075 aa13.14□□□□□ -0.31
TRIM23-203ENST00000381018 FAM196BA6NMK8 535 aa13.14□□□□□ -0.31
TRIM23-203ENST00000381018 MEIS2O14770 477 aa13.14□□□□□ -0.31
TRIM23-203ENST00000381018 TBX3O15119 743 aa13.14□□□□□ -0.31
TRIM23-203ENST00000381018 ZMYND10O75800 440 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms