RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 AMFRQ9UKV5 643 aa13.42□□□□□ -0.26
GABPB1-203ENST00000380877 TCRBV5S4A2TA0A5A2 114 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 TRIM49BA6NDI0 452 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 PRELPP51888 382 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 YWHAEP62258 255 aaKnown RBP13.41□□□□□ -0.26
GABPB1-203ENST00000380877 MKRN3Q13064 507 aaKnown RBP13.41□□□□□ -0.26
GABPB1-203ENST00000380877 WHAMMP3Q1A5X7 153 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
GABPB1-203ENST00000380877 VGLL2Q8N8G2 317 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 TRERF1Q96PN7 1200 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 FBXO40Q9UH90 709 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 INO80B-WBP1J3KQ70 363 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 TNNC2P02585 160 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 P4HA1P13674 534 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 DAAM2Q86T65 1068 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 MAK16Q9BXY0 300 aaKnown RBP13.41□□□□□ -0.26
GABPB1-203ENST00000380877 INO80BQ9C086 356 aaPredicted RBP13.41□□□□□ -0.26
GABPB1-203ENST00000380877 SPON1Q9HCB6 807 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 PDS5AQ29RF7 1337 aaKnown RBP13.41□□□□□ -0.26
GABPB1-203ENST00000380877 NFAT5O94916 1531 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 PIK3C2AO00443 1686 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 CA8P35219 290 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 PPP4R3CPQ6ZMV5 832 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 NSUN6Q8TEA1 469 aaKnown RBP13.41□□□□□ -0.26
GABPB1-203ENST00000380877 RPGRIP1Q96KN7 1286 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 TRIM31Q9BZY9 425 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 BZW2Q9Y6E2 419 aaKnown RBP13.41□□□□□ -0.26
GABPB1-203ENST00000380877 POTEFA5A3E0 1075 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 MAP3K9P80192 1104 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 TFDP1Q14186 410 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 ARID5BQ14865 1188 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 POTEGQ6S5H5 508 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 POTEEQ6S8J3 1075 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 NT5C1BQ96P26 610 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 HYOU1Q9Y4L1 999 aa13.41□□□□□ -0.26
GABPB1-203ENST00000380877 A0A1W2PRG0 241 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 ACTN4O43707 911 aaKnown RBP13.4□□□□□ -0.26
GABPB1-203ENST00000380877 ERCC6LQ2NKX8 1250 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 ZNF354CQ86Y25 554 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 IFT20Q8IY31 132 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 TBC1D22BQ9NU19 505 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 STXBP3O00186 592 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 FDX1P10109 184 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 CNGA1P29973 690 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 PDE6CP51160 858 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 SNX16P57768 344 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 NFIAQ12857 509 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 USP49Q70CQ1 688 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 ZNF365Q70YC5 407 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 SFR1Q86XK3 245 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 CCSER1Q9C0I3 900 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 WDR64B1ANS9 1081 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 IPO5O00410 1097 aaKnown RBP13.4□□□□□ -0.26
GABPB1-203ENST00000380877 STAT3P40763 770 aa13.4□□□□□ -0.26
GABPB1-203ENST00000380877 RTFDC1Q9BY42 306 aaPredicted RBP13.4□□□□□ -0.26
GABPB1-203ENST00000380877 SMIM23A6NLE4 172 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 POLRMTO00411 1230 aaKnown RBP13.39□□□□□ -0.27
GABPB1-203ENST00000380877 FERP16591 822 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 TCP1P17987 556 aaKnown RBP13.39□□□□□ -0.27
GABPB1-203ENST00000380877 JAK3P52333 1124 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 PTPROQ16827 1216 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 PNMA3Q9UL41 463 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 SOWAHDA6NJG2 315 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 KCNK3O14649 394 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 HMGCS2P54868 508 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 RASSF7Q02833 373 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 PTF1AQ7RTS3 328 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 HACE1Q8IYU2 909 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 MB21D1Q8N884 522 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 ST7Q9NRC1 585 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 VPS18Q9P253 973 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 UBE2Q2LH0YL09 131 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 STXBP2Q15833 593 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 SLC35F6Q8N357 371 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 BANK1Q8NDB2 785 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-203ENST00000380877 UBLCP1Q8WVY7 318 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-203ENST00000380877 DYDC2Q96IM9 177 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-203ENST00000380877 AGXT2Q9BYV1 514 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 GCNT4Q9P109 453 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 UTP11Q9Y3A2 253 aaKnown RBP13.39□□□□□ -0.27
GABPB1-203ENST00000380877 PEX3P56589 373 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 MICALCLQ6ZW33 695 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 PDLIM2Q96JY6 352 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 PANX2Q96RD6 677 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 TMEM39BQ9GZU3 492 aa13.39□□□□□ -0.27
GABPB1-203ENST00000380877 RPAP3Q9H6T3 665 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-203ENST00000380877 ZHX1Q9UKY1 873 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-203ENST00000380877 KRT76Q01546 638 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 COASYQ13057 564 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 ALCAMQ13740 583 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 CEP55Q53EZ4 464 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 RNF187Q5TA31 235 aaPredicted RBP13.38□□□□□ -0.27
GABPB1-203ENST00000380877 ACRBPQ8NEB7 543 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 ZMYND12Q9H0C1 365 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 STMN4Q9H169 189 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms