RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 CENPPQ6IPU0 288 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 KLHL7Q8IXQ5 586 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 TDRD3Q9H7E2 651 aaKnown RBP21.51■■□□□ 1.03
FOXC1-201ENST00000380874 FAM204AQ9H8W3 233 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 PCDHAC2Q9Y5I4 1007 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 TCP10L2B9ZVM9 353 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 VPS36Q86VN1 386 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 RDH13Q8NBN7 331 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 RIN2Q8WYP3 895 aaPredicted RBP21.51■■□□□ 1.03
FOXC1-201ENST00000380874 NAP1L4Q99733 375 aaKnown RBP21.51■■□□□ 1.03
FOXC1-201ENST00000380874 ZBTB21Q9ULJ3 1066 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 SAMM50Q9Y512 469 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 CAPN6Q9Y6Q1 641 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 CYP2C19P33261 490 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 TRAPPC11Q7Z392 1133 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 CERS5Q8N5B7 392 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 ERGIC2Q96RQ1 377 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 CRAMP1Q96RY5 1269 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.51■■□□□ 1.03
FOXC1-201ENST00000380874 TRPC5Q9UL62 973 aaPredicted RBP21.51■■□□□ 1.03
FOXC1-201ENST00000380874 TIAM2Q8IVF5 1701 aa21.51■■□□□ 1.03
FOXC1-201ENST00000380874 CLRN2A0PK11 232 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 USP8P40818 1118 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 MYCT1Q8N699 235 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 RPGRIP1Q96KN7 1286 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 BHMT2Q9H2M3 363 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 ARHGAP20Q9P2F6 1191 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 ATP6V0A2Q9Y487 856 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 GOLGA6BA6NDN3 693 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 GH2P01242 217 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 ARHGAP4P98171 946 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 FAM83BQ5T0W9 1011 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.5■■□□□ 1.03
FOXC1-201ENST00000380874 ABCA3Q99758 1704 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 PSMD2Q13200 908 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 AFAP1L1Q8TED9 768 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 PI4KBQ9UBF8 816 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 PACSIN2Q9UNF0 486 aaPredicted RBP21.5■■□□□ 1.03
FOXC1-201ENST00000380874 LRP5O75197 1615 aa21.5■■□□□ 1.03
FOXC1-201ENST00000380874 F5H6K3 240 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 KLRC3Q07444 240 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 PIGOQ8TEQ8 1089 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 COG1Q8WTW3 980 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 GLT8D2Q9H1C3 349 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 RNF40O75150 1001 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 APBA3O96018 575 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 MIIPQ5JXC2 388 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 SLC30A10Q6XR72 485 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 NLGN1Q8N2Q7 840 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 MTMR9Q96QG7 549 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 TCP1P17987 556 aaKnown RBP21.49■■□□□ 1.03
FOXC1-201ENST00000380874 L1RE1Q9UN81 338 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 STRCQ7RTU9 1775 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 XRCC5P13010 732 aaKnown RBP21.49■■□□□ 1.03
FOXC1-201ENST00000380874 SHMT1P34896 483 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 SFR1Q86XK3 245 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 SLFN12Q8IYM2 578 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 IQCDQ96DY2 449 aa21.49■■□□□ 1.03
FOXC1-201ENST00000380874 EPB41P11171 864 aaKnown RBP21.48■■□□□ 1.03
FOXC1-201ENST00000380874 SMARCA1P28370 1054 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 PDE6BP35913 854 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 MSANTD4Q8NCY6 345 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 PLAGL2Q9UPG8 496 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 HSF2BPO75031 334 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 NPR1P16066 1061 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 CSRNP1Q96S65 589 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 CACNA1SQ13698 1873 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 RGL2O15211 777 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 GUCY2FP51841 1108 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 ECM1Q16610 540 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 CFAP221Q4G0U5 840 aa21.48■■□□□ 1.03
FOXC1-201ENST00000380874 NHSL1Q5SYE7 1610 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 CTTNQ14247 550 aaKnown RBP21.47■■□□□ 1.03
FOXC1-201ENST00000380874 PDXDC1Q6P996 788 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 MS4A14Q96JA4 679 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 HDAC9Q9UKV0 1011 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 H0YIN7 160 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 KRT27Q7Z3Y8 459 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 MAATS1Q7Z4T9 603 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 C10orf67Q8IYJ2 551 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 FAM71BQ8TC56 605 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 FAM163AQ96GL9 167 aaPredicted RBP21.47■■□□□ 1.03
FOXC1-201ENST00000380874 OSBPL9Q96SU4 736 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 ROBO3Q96MS0 1386 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 LRRIQ3A6PVS8 624 aaPredicted RBP21.47■■□□□ 1.03
FOXC1-201ENST00000380874 CEP104O60308 925 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 GNA14O95837 355 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 ACTN1P12814 892 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 RPL13P26373 211 aaKnown RBP21.47■■□□□ 1.03
FOXC1-201ENST00000380874 CYP2J2P51589 502 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 KCNH2Q12809 1159 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 ORC2Q13416 577 aaPredicted RBP21.47■■□□□ 1.03
FOXC1-201ENST00000380874 LRRC1Q9BTT6 524 aa21.47■■□□□ 1.03
FOXC1-201ENST00000380874 RGL1Q9NZL6 768 aa21.46■■□□□ 1.03
FOXC1-201ENST00000380874 SNX12Q9UMY4 172 aa21.46■■□□□ 1.03
FOXC1-201ENST00000380874 PPP1R11O60927 126 aaPredicted RBP21.46■■□□□ 1.03
FOXC1-201ENST00000380874 BMP3P12645 472 aa21.46■■□□□ 1.03
FOXC1-201ENST00000380874 EZH2Q15910 746 aaKnown RBP21.46■■□□□ 1.03
FOXC1-201ENST00000380874 FNBP4Q8N3X1 1017 aaPredicted RBP21.46■■□□□ 1.03
FOXC1-201ENST00000380874 SELENOOQ9BVL4 669 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms