RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 TBC1D10BQ4KMP7 808 aaPredicted RBP21.41■■□□□ 1.02
GMDS-201ENST00000380805 DCAF15Q66K64 600 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 NCAPH2Q6IBW4 605 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 POTEGQ6S5H5 508 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 POTEEQ6S8J3 1075 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 HOOK2Q96ED9 719 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 ABHD10Q9NUJ1 306 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 MAP3K20Q9NYL2 800 aaKnown RBP21.41■■□□□ 1.02
GMDS-201ENST00000380805 PNMA2Q9UL42 364 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 RLFQ13129 1914 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 PHLPP2Q6ZVD8 1323 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 MUTP22033 750 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 ARSHQ5FYA8 562 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 MIIPQ5JXC2 388 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 TRIM65Q6PJ69 517 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 LRRC55Q6ZSA7 311 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 OTOP1Q7RTM1 612 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 GPBP1Q86WP2 473 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 APOBEC3FQ8IUX4 373 aaKnown RBP21.4■■□□□ 1.02
GMDS-201ENST00000380805 MYOCDQ8IZQ8 938 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 SLC38A10Q9HBR0 1119 aa21.4■■□□□ 1.02
GMDS-201ENST00000380805 SCAF8Q9UPN6 1271 aaKnown RBP21.4■■□□□ 1.02
GMDS-201ENST00000380805 MEIS1O00470 390 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 USP14P54578 494 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 CEP55Q53EZ4 464 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 B3GNT9Q6UX72 402 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 RETREG2Q8NC44 543 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 CLEC4DQ8WXI8 215 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 ERGIC2Q96RQ1 377 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 TUFT1Q9NNX1 390 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 CCPG1Q9ULG6 757 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 DNM3Q9UQ16 869 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 FRMPD4Q14CM0 1322 aa21.39■■□□□ 1.01
GMDS-201ENST00000380805 FDX1P10109 184 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 FIGNQ5HY92 759 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 NBPF12Q5TAG4 269 aaPredicted RBP21.38■■□□□ 1.01
GMDS-201ENST00000380805 TOGARAM2Q6ZUX3 1019 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 TMTC1Q8IUR5 882 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 HSD17B14Q9BPX1 270 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 TTYH3Q9C0H2 523 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.38■■□□□ 1.01
GMDS-201ENST00000380805 BCRP11274 1271 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 EPS15P42566 896 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 SYCP1Q15431 976 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 RAD9BQ6WBX8 426 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 NIPA1Q7RTP0 329 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 MCF2L2Q86YR7 1114 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 ZC3H3Q8IXZ2 948 aaKnown RBP21.38■■□□□ 1.01
GMDS-201ENST00000380805 SCYL3Q8IZE3 742 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 IQCDQ96DY2 449 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 AGBL1Q96MI9 1066 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 DNAJC7Q99615 494 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 TSG101Q99816 390 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 EIF2AK1Q9BQI3 630 aaKnown RBP21.38■■□□□ 1.01
GMDS-201ENST00000380805 NUP58Q9BVL2 599 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 L2HGDHQ9H9P8 463 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 PPP1R9AQ9ULJ8 1098 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 CAPN11Q9UMQ6 739 aa21.38■■□□□ 1.01
GMDS-201ENST00000380805 SOWAHDA6NJG2 315 aa21.37■■□□□ 1.01
GMDS-201ENST00000380805 RNF225M0QZC1 329 aaPredicted RBP21.37■■□□□ 1.01
GMDS-201ENST00000380805 EML1O00423 815 aa21.37■■□□□ 1.01
GMDS-201ENST00000380805 KIF20AO95235 890 aa21.37■■□□□ 1.01
GMDS-201ENST00000380805 VCAM1P19320 739 aa21.37■■□□□ 1.01
GMDS-201ENST00000380805 CPLX3Q8WVH0 158 aa21.37■■□□□ 1.01
GMDS-201ENST00000380805 UIMC1Q96RL1 719 aa21.37■■□□□ 1.01
GMDS-201ENST00000380805 EMILIN3Q9NT22 766 aa21.37■■□□□ 1.01
GMDS-201ENST00000380805 GPRC5DQ9NZD1 345 aa21.37■■□□□ 1.01
GMDS-201ENST00000380805 PPP2R3BQ9Y5P8 575 aa21.37■■□□□ 1.01
GMDS-201ENST00000380805 B4DLN1 442 aa21.36■■□□□ 1.01
GMDS-201ENST00000380805 EYA4O95677 639 aa21.36■■□□□ 1.01
GMDS-201ENST00000380805 SSBP05455 408 aaKnown RBP eCLIP21.36■■□□□ 1.01
GMDS-201ENST00000380805 CCDC175P0C221 793 aa21.36■■□□□ 1.01
GMDS-201ENST00000380805 PRKCSHP14314 528 aaPredicted RBP21.36■■□□□ 1.01
GMDS-201ENST00000380805 PSMC6P62333 389 aa21.36■■□□□ 1.01
GMDS-201ENST00000380805 GIT2Q14161 759 aa21.36■■□□□ 1.01
GMDS-201ENST00000380805 LRCH2Q5VUJ6 765 aa21.36■■□□□ 1.01
GMDS-201ENST00000380805 GLIS3Q8NEA6 775 aa21.36■■□□□ 1.01
GMDS-201ENST00000380805 ZNF526Q8TF50 670 aaPredicted RBP21.36■■□□□ 1.01
GMDS-201ENST00000380805 ZNF592Q92610 1267 aa21.36■■□□□ 1.01
GMDS-201ENST00000380805 L3MBTL3Q96JM7 780 aaPredicted RBP21.36■■□□□ 1.01
GMDS-201ENST00000380805 WDR11Q9BZH6 1224 aa21.36■■□□□ 1.01
GMDS-201ENST00000380805 ADGRG1Q9Y653 693 aa21.36■■□□□ 1.01
GMDS-201ENST00000380805 KRT9P35527 623 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 MTIF2P46199 727 aaKnown RBP21.35■■□□□ 1.01
GMDS-201ENST00000380805 MAN2A1Q16706 1144 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 KRT26Q7Z3Y9 468 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 CREBRFQ8IUR6 639 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 C12orf42Q96LP6 360 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 RIT2Q99578 217 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 NOC4LQ9BVI4 516 aaKnown RBP21.35■■□□□ 1.01
GMDS-201ENST00000380805 PAPPA2Q9BXP8 1791 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 TTC26A0AVF1 554 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 MARSP56192 900 aaKnown RBP21.35■■□□□ 1.01
GMDS-201ENST00000380805 MTMR2Q13614 643 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 MTF1Q14872 753 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 CYP26C1Q6V0L0 522 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 SYT10Q6XYQ8 523 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 PPP4R3CPQ6ZMV5 832 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 SCFD1Q8WVM8 642 aa21.35■■□□□ 1.01
GMDS-201ENST00000380805 CEP63Q96MT8 703 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms