RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 PRPF3O43395 683 aaKnown RBP18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 AP2B1P63010 937 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 CHMP6Q96FZ7 201 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 MRPL40Q9NQ50 206 aaKnown RBP18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 TBK1Q9UHD2 729 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 TTC37Q6PGP7 1564 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 LGALS16A8MUM7 142 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 MIF4GDA9UHW6 222 aaKnown RBP18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 CA4P22748 312 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 ABCD1P33897 745 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 ADCY1Q08828 1119 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.46■□□□□ 0.554e-7■■■■■ 58.1
COL4A3BP-203ENST00000380494 MEFVO15553 781 aaPredicted RBP18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 GRAMD1BQ3KR37 738 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 CCDC92Q53HC0 331 aaPredicted RBP18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 CRLF3Q8IUI8 442 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 UPF3AQ9H1J1 476 aaKnown RBP18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 ST7Q9NRC1 585 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 CEP72Q9P209 647 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 ATP10DQ9P241 1426 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 NOP56O00567 594 aaKnown RBP18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 SRGAP2BP0DMP2 458 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 CEP70Q8NHQ1 597 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 GCNT4Q9P109 453 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 LCMT1Q9UIC8 334 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 KIAA1024Q9UPX6 916 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 A6NJR5 290 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 HNRNPCL1O60812 293 aaKnown RBP18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 KRT1P04264 644 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 MUM1L1Q5H9M0 696 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 KRT39Q6A163 491 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 TTC25Q96NG3 672 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 ACTN3Q08043 901 aaPredicted RBP18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 USP27XA6NNY8 438 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 OCA2Q04671 838 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 ANKRD65E5RJM6 399 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 CTIFO43310 598 aaKnown RBP18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 BIRC2Q13490 618 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 CHURC1Q8WUH1 139 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 MAML1Q92585 1016 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 STAMBPL1Q96FJ0 436 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 NGLY1Q96IV0 654 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 NUB1Q9Y5A7 615 aa18.45■□□□□ 0.54
COL4A3BP-203ENST00000380494 GNGT2O14610 69 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 CEBPAP49715 358 aaPredicted RBP18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 MAGOHP61326 146 aaKnown RBP18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 TEDDM1Q5T9Z0 273 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 GJA10Q969M2 543 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 TOM1L1O75674 476 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 PALMO75781 387 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 POLR2MP0CAP2 368 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 PMS2P54278 862 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 EPN3Q9H201 632 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 CXorf56Q9H5V9 222 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 TMEM206Q9H813 350 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 CYP27A1Q02318 531 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 SEMA3FQ13275 785 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 RAPH1Q70E73 1250 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 ZBTB8OSQ8IWT0 167 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 SEPT10Q9P0V9 454 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 PNMA2Q9UL42 364 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 INTUQ9ULD6 942 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 MRPL11Q9Y3B7 192 aaKnown RBP18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 EIF4G3O43432 1585 aaKnown RBP18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 FGGP02679 453 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 C16orf87Q6PH81 154 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 ADGRG1Q9Y653 693 aa18.44■□□□□ 0.54
COL4A3BP-203ENST00000380494 GFPT2O94808 682 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 FSCBQ5H9T9 825 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 ACCSQ96QU6 501 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 OSBPL1AQ9BXW6 950 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 TTLL3Q9Y4R7 772 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 FMR1NBQ8N0W7 255 aaPredicted RBP18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 CNBD1Q8NA66 436 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 TAF1DQ9H5J8 278 aaPredicted RBP18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 NT5C2P49902 561 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 MYO1EQ12965 1108 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 OSBPL9Q96SU4 736 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 EEF1B2P24534 225 aaKnown RBP18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 YARSP54577 528 aaKnown RBP18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 LRRC37BQ96QE4 947 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 PCCAP05165 728 aaPredicted RBP18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 HDLBPQ00341 1268 aaKnown RBP18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 EPM2AIP1Q7L775 607 aaPredicted RBP18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 PCGF5Q86SE9 256 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 SMCR8Q8TEV9 937 aaPredicted RBP18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 PGBD1Q96JS3 809 aa18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 CDCA7Q9BWT1 371 aaPredicted RBP18.43■□□□□ 0.54
COL4A3BP-203ENST00000380494 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 HAUS5O94927 633 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 ZBTB38Q8NAP3 1195 aaPredicted RBP18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 DYDC2Q96IM9 177 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 ALDH8A1Q9H2A2 487 aaPredicted RBP18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 RANBP1P43487 201 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 LRIG3Q6UXM1 1119 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 HESX1Q9UBX0 185 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 PCDHB4Q9Y5E5 795 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 STK36Q9NRP7 1315 aa18.42■□□□□ 0.54
COL4A3BP-203ENST00000380494 STXBP3O00186 592 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms