RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 E2F6O75461 281 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 PPARAQ07869 468 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 NR5A1Q13285 461 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 TNNI3KQ59H18 835 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 RRM2BQ7LG56 351 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 RPF1Q9H9Y2 349 aaKnown RBP12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 DOLKQ9UPQ8 538 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 CCDC78A2IDD5 438 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 FMNL1O95466 1100 aaPredicted RBP12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 NT5C1BQ96P26 610 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 KCNH4Q9UQ05 1017 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 CFAP43Q8NDM7 1665 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 SERPINB2P05120 415 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 TJAP1Q5JTD0 557 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 NUDCD3Q8IVD9 361 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 E5RI56 91 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 MRPL28Q13084 256 aaKnown RBP12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 CUL1Q13616 776 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 GTF2H3Q13889 308 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 ABCB5Q2M3G0 1257 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 FBXO31Q5XUX0 539 aaPredicted RBP12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 SEL1LQ9UBV2 794 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 GCKP35557 465 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 CEBPAP49715 358 aaPredicted RBP12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 CTDSPL2Q05D32 466 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 ADAT2Q7Z6V5 191 aaKnown RBP12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 ANKRD44Q8N8A2 993 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 CCDC197Q8NCU1 140 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 LPIN2Q92539 896 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 LAMC3Q9Y6N6 1575 aa12.08□□□□□ -0.47
PTCHD1-201ENST00000379361 PLEKHM3Q6ZWE6 761 aa12.08□□□□□ -0.47
PTCHD1-201ENST00000379361 TEX9Q8N6V9 391 aa12.08□□□□□ -0.47
PTCHD1-201ENST00000379361 PPP1R13BQ96KQ4 1090 aa12.08□□□□□ -0.47
PTCHD1-201ENST00000379361 PSAPP07602 524 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 ZNF189O75820 626 aaPredicted RBP12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 MAPK4P31152 587 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 CCDC127Q96BQ5 260 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 EYA2O00167 538 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 TCF3P15923 654 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 ICA1Q05084 483 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 PBXIP1Q96AQ6 731 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 TRIM62Q9BVG3 475 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 RIMS2Q9UQ26 1411 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 PYGMP11217 842 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 SLC9A1P19634 815 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 POC1B-GALNT4F8VUJ3 575 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 GOLGA8TH3BQL2 631 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 GOLGA8HP0CJ92 632 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 CAPN11Q9UMQ6 739 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 PARD3Q8TEW0 1356 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 TTC23LQ6PF05 361 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 ZNF577Q9BSK1 485 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 METTL22Q9BUU2 404 aaPredicted RBP12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 DDAH1O94760 285 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 C10orf76Q5T2E6 689 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 DARS2Q6PI48 645 aaKnown RBP12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 RDH13Q8NBN7 331 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 DNAJC7Q99615 494 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 L3MBTL1Q9Y468 752 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 PCYT1AP49585 367 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 PHKBQ93100 1093 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 CNOT10Q9H9A5 744 aaKnown RBP12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 RPRD1BQ9NQG5 326 aaKnown RBP12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 LAD1O00515 517 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 MYH7BA7E2Y1 1941 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 KCNA1Q09470 495 aa12.08□□□□□ -0.48
PTCHD1-201ENST00000379361 EXOC3L4Q17RC7 722 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 ASPRV1Q53RT3 343 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 KDM4CQ9H3R0 1056 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 MOCS3O95396 460 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 PLA2G4DQ86XP0 818 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 PHLPP2Q6ZVD8 1323 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 GOLGA8RI6L899 631 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 SLC27A2O14975 620 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 DNAJC24Q6P3W2 148 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 GTF2IP78347 998 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 PHKG1Q16816 387 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 CRLF3Q8IUI8 442 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 KIF2CQ99661 725 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 RPRD2Q5VT52 1461 aaKnown RBP12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 LBHD1Q9BQE6 289 aaPredicted RBP12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 DUOX2Q9NRD8 1548 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 MYH13Q9UKX3 1938 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 ZRANB2O95218 330 aaKnown RBP eCLIP12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 KRT7P08729 469 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 TECP42680 631 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 C16orf87Q6PH81 154 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 ING2Q9H160 280 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 FIS1Q9Y3D6 152 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 NPATQ14207 1427 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 URB2Q14146 1524 aaKnown RBP12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 SYNDIG1LA6NDD5 238 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 TCP10L2B9ZVM9 353 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 TRPA1O75762 1119 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 ACAD11Q709F0 780 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 SCYL3Q8IZE3 742 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 WDR48Q8TAF3 677 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms