RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 SEMA3FQ13275 785 aa28.26■■■□□ 2.11
TNFRSF4-201ENST00000379236 SENP7Q9BQF6 1050 aa28.26■■■□□ 2.11
TNFRSF4-201ENST00000379236 USP26Q9BXU7 913 aa28.26■■■□□ 2.11
TNFRSF4-201ENST00000379236 GLT8D2Q9H1C3 349 aa28.26■■■□□ 2.11
TNFRSF4-201ENST00000379236 TUT1Q9H6E5 874 aaKnown RBP28.26■■■□□ 2.11
TNFRSF4-201ENST00000379236 ZNF215Q9UL58 517 aaPredicted RBP28.26■■■□□ 2.11
TNFRSF4-201ENST00000379236 SELPP16109 830 aa28.25■■■□□ 2.11
TNFRSF4-201ENST00000379236 CDC27P30260 824 aa28.25■■■□□ 2.11
TNFRSF4-201ENST00000379236 PTK7Q13308 1070 aa28.25■■■□□ 2.11
TNFRSF4-201ENST00000379236 MTMR1Q13613 665 aa28.25■■■□□ 2.11
TNFRSF4-201ENST00000379236 LRRC8DQ7L1W4 858 aa28.25■■■□□ 2.11
TNFRSF4-201ENST00000379236 TEX2Q8IWB9 1127 aa28.25■■■□□ 2.11
TNFRSF4-201ENST00000379236 MYLIPQ8WY64 445 aa28.25■■■□□ 2.11
TNFRSF4-201ENST00000379236 C16orf70Q9BSU1 422 aa28.25■■■□□ 2.11
TNFRSF4-201ENST00000379236 BCAS3Q9H6U6 928 aa28.25■■■□□ 2.11
TNFRSF4-201ENST00000379236 RIC8AQ9NPQ8 531 aa28.25■■■□□ 2.11
TNFRSF4-201ENST00000379236 C17orf102A2RUQ5 167 aa28.24■■■□□ 2.11
TNFRSF4-201ENST00000379236 EPB41L2O43491 1005 aaKnown RBP28.24■■■□□ 2.11
TNFRSF4-201ENST00000379236 PARNO95453 639 aaKnown RBP28.24■■■□□ 2.11
TNFRSF4-201ENST00000379236 FOSL2P15408 326 aa28.24■■■□□ 2.11
TNFRSF4-201ENST00000379236 PBX2P40425 430 aa28.24■■■□□ 2.11
TNFRSF4-201ENST00000379236 FUT2Q10981 343 aa28.24■■■□□ 2.11
TNFRSF4-201ENST00000379236 UTP14CQ5TAP6 766 aaKnown RBP28.24■■■□□ 2.11
TNFRSF4-201ENST00000379236 GPR20Q99678 358 aa28.24■■■□□ 2.11
TNFRSF4-201ENST00000379236 ZNF576Q9H609 170 aa28.24■■■□□ 2.11
TNFRSF4-201ENST00000379236 BARHL2Q9NY43 387 aa28.24■■■□□ 2.11
TNFRSF4-201ENST00000379236 SMCO2A6NFE2 343 aa28.23■■■□□ 2.11
TNFRSF4-201ENST00000379236 STXBP3O00186 592 aa28.23■■■□□ 2.11
TNFRSF4-201ENST00000379236 FOSP01100 380 aaPredicted RBP28.23■■■□□ 2.11
TNFRSF4-201ENST00000379236 ADD1P35611 737 aaKnown RBP28.23■■■□□ 2.11
TNFRSF4-201ENST00000379236 AKAP17AQ02040 695 aaKnown RBP28.23■■■□□ 2.11
TNFRSF4-201ENST00000379236 TET1Q8NFU7 2136 aa28.23■■■□□ 2.11
TNFRSF4-201ENST00000379236 CKBP12277 381 aa28.22■■■□□ 2.11
TNFRSF4-201ENST00000379236 ATP2A2P16615 1042 aaKnown RBP28.22■■■□□ 2.11
TNFRSF4-201ENST00000379236 ERICH6BQ5W0A0 696 aa28.22■■■□□ 2.11
TNFRSF4-201ENST00000379236 DHX38Q92620 1227 aaKnown RBP28.22■■■□□ 2.11
TNFRSF4-201ENST00000379236 CTAGE1Q96RT6 745 aa28.22■■■□□ 2.11
TNFRSF4-201ENST00000379236 FAM217BQ9NTX9 383 aaPredicted RBP28.22■■■□□ 2.11
TNFRSF4-201ENST00000379236 PKD2L1Q9P0L9 805 aa28.22■■■□□ 2.11
TNFRSF4-201ENST00000379236 ITGB5P18084 799 aa28.21■■■□□ 2.11
TNFRSF4-201ENST00000379236 TYW1BQ6NUM6 668 aa28.21■■■□□ 2.11
TNFRSF4-201ENST00000379236 CCDC12Q8WUD4 166 aaPredicted RBP28.21■■■□□ 2.11
TNFRSF4-201ENST00000379236 ATP6V0A1Q93050 837 aa28.21■■■□□ 2.11
TNFRSF4-201ENST00000379236 ANO3Q9BYT9 981 aa28.21■■■□□ 2.11
TNFRSF4-201ENST00000379236 SLC28A3Q9HAS3 691 aa28.21■■■□□ 2.11
TNFRSF4-201ENST00000379236 JADE2Q9NQC1 790 aa28.21■■■□□ 2.11
TNFRSF4-201ENST00000379236 UBIAD1Q9Y5Z9 338 aa28.21■■■□□ 2.11
TNFRSF4-201ENST00000379236 MAFGO15525 162 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 CENPBP07199 599 aaPredicted RBP28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 SMIM10L2AP0DMW4 78 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 SMIM10L2BP0DMW5 78 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 GNAT1P11488 350 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 SCG2P13521 617 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 KCNJ6P48051 423 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 ZNF200P98182 395 aaPredicted RBP28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 RBL2Q08999 1139 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 AP3B2Q13367 1082 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 PFKFB3Q16875 520 aaPredicted RBP28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 PGBD1Q96JS3 809 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 SLC9A7Q96T83 725 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 NKX2-4Q9H2Z4 354 aa28.2■■■□□ 2.1
TNFRSF4-201ENST00000379236 BAIAP3O94812 1187 aa28.19■■■□□ 2.1
TNFRSF4-201ENST00000379236 KCNA2P16389 499 aa28.19■■■□□ 2.1
TNFRSF4-201ENST00000379236 GRIN2CQ14957 1233 aa28.19■■■□□ 2.1
TNFRSF4-201ENST00000379236 RUFY3Q7L099 469 aa28.19■■■□□ 2.1
TNFRSF4-201ENST00000379236 FBXL16Q8N461 479 aa28.19■■■□□ 2.1
TNFRSF4-201ENST00000379236 VWCEQ96DN2 955 aa28.19■■■□□ 2.1
TNFRSF4-201ENST00000379236 CYP46A1Q9Y6A2 500 aa28.19■■■□□ 2.1
TNFRSF4-201ENST00000379236 NID2Q14112 1375 aa28.19■■■□□ 2.1
TNFRSF4-201ENST00000379236 ATP9AO75110 1047 aa28.18■■■□□ 2.1
TNFRSF4-201ENST00000379236 TCF7P36402 384 aaPredicted RBP28.18■■■□□ 2.1
TNFRSF4-201ENST00000379236 ZNF76P36508 570 aa28.18■■■□□ 2.1
TNFRSF4-201ENST00000379236 RABGGTBP53611 331 aa28.18■■■□□ 2.1
TNFRSF4-201ENST00000379236 TRIM50Q86XT4 487 aa28.18■■■□□ 2.1
TNFRSF4-201ENST00000379236 MAFAQ8NHW3 353 aaPredicted RBP28.18■■■□□ 2.1
TNFRSF4-201ENST00000379236 GAS2L1Q99501 681 aaPredicted RBP28.18■■■□□ 2.1
TNFRSF4-201ENST00000379236 MXRA8Q9BRK3 442 aa28.18■■■□□ 2.1
TNFRSF4-201ENST00000379236 MYO9BQ13459 2157 aa28.18■■■□□ 2.1
TNFRSF4-201ENST00000379236 THPOP40225 353 aa28.17■■■□□ 2.1
TNFRSF4-201ENST00000379236 SERINC5Q86VE9 423 aa28.17■■■□□ 2.1
TNFRSF4-201ENST00000379236 SEPT1Q8WYJ6 367 aa28.17■■■□□ 2.1
TNFRSF4-201ENST00000379236 SDF4Q9BRK5 362 aa28.17■■■□□ 2.1
TNFRSF4-201ENST00000379236 AGXT2Q9BYV1 514 aa28.17■■■□□ 2.1
TNFRSF4-201ENST00000379236 C6orf50Q9HD87 102 aa28.17■■■□□ 2.1
TNFRSF4-201ENST00000379236 TMEM260Q9NX78 707 aa28.17■■■□□ 2.1
TNFRSF4-201ENST00000379236 PCDHA11Q9Y5I1 949 aa28.17■■■□□ 2.1
TNFRSF4-201ENST00000379236 PRPF3O43395 683 aaKnown RBP28.16■■■□□ 2.1
TNFRSF4-201ENST00000379236 ZNF618Q5T7W0 954 aa28.16■■■□□ 2.1
TNFRSF4-201ENST00000379236 PPP2R2DQ66LE6 453 aa28.16■■■□□ 2.1
TNFRSF4-201ENST00000379236 CNKSR3Q6P9H4 555 aa28.16■■■□□ 2.1
TNFRSF4-201ENST00000379236 RNPEPQ9H4A4 650 aa28.16■■■□□ 2.1
TNFRSF4-201ENST00000379236 JPH1Q9HDC5 661 aaPredicted RBP28.16■■■□□ 2.1
TNFRSF4-201ENST00000379236 CDH23Q9H251 3354 aa28.16■■■□□ 2.1
TNFRSF4-201ENST00000379236 PTPRSQ13332 1948 aa28.16■■■□□ 2.1
TNFRSF4-201ENST00000379236 KIF28PB7ZC32 967 aa28.15■■■□□ 2.1
TNFRSF4-201ENST00000379236 JAKMIP3Q5VZ66 844 aa28.15■■■□□ 2.1
TNFRSF4-201ENST00000379236 MCTP2Q6DN12 878 aa28.15■■■□□ 2.1
TNFRSF4-201ENST00000379236 PHOSPHO2Q8TCD6 241 aa28.15■■■□□ 2.1
TNFRSF4-201ENST00000379236 GLG1Q92896 1179 aa28.15■■■□□ 2.1
TNFRSF4-201ENST00000379236 PHKBQ93100 1093 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms