RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 KCNA2P16389 499 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 SYT1P21579 422 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 TRAPPC10P48553 1259 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 SP2Q02086 613 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 ORC2Q13416 577 aaPredicted RBP13.52□□□□□ -0.25
PCNA-201ENST00000379143 PRR16Q569H4 304 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 EARS2Q5JPH6 523 aaKnown RBP13.52□□□□□ -0.25
PCNA-201ENST00000379143 TMEM63BQ5T3F8 832 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 MYSM1Q5VVJ2 828 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 MCTP1Q6DN14 999 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 PPTC7Q8NI37 304 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 COPS5Q92905 334 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 SPATA33Q96N06 139 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 MBOAT7Q96N66 472 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 ZNF577Q9BSK1 485 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 AGO4Q9HCK5 861 aaKnown RBP13.52□□□□□ -0.25
PCNA-201ENST00000379143 TBC1D22BQ9NU19 505 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 POLR3EQ9NVU0 708 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 DDX25Q9UHL0 483 aaKnown RBP13.52□□□□□ -0.25
PCNA-201ENST00000379143 NFASCO94856 1347 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 VPS37CA5D8V6 355 aaPredicted RBP13.51□□□□□ -0.25
PCNA-201ENST00000379143 IPO5O00410 1097 aaKnown RBP13.51□□□□□ -0.25
PCNA-201ENST00000379143 NOP56O00567 594 aaKnown RBP13.51□□□□□ -0.25
PCNA-201ENST00000379143 EDIL3O43854 480 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 ATP9AO75110 1047 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 CABYRO75952 493 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 TDP2O95551 362 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 ARP10275 920 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 ACLYP53396 1101 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
PCNA-201ENST00000379143 KCNA10Q16322 511 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 DGKDQ16760 1214 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 CCSAPQ6IQ19 270 aaPredicted RBP13.51□□□□□ -0.25
PCNA-201ENST00000379143 CYFIP1Q7L576 1253 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 NECAB2Q7Z6G3 386 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 LENG9Q96B70 501 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 TCEAL9Q9UHQ7 104 aa13.51□□□□□ -0.25
PCNA-201ENST00000379143 FAM205CA6NFA0 338 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 TBX3O15119 743 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 CTAGE5O15320 804 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 STX6O43752 255 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 PPFIA4O75335 1185 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 ASGR1P07306 291 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 MMP3P08254 477 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 BEX3Q00994 111 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 HSDL1Q3SXM5 330 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 BRAPQ7Z569 592 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 AFG1LQ8WV93 481 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 FAM20AQ96MK3 541 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 GLT1D1Q96MS3 346 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 RIT2Q99578 217 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 C11orf49Q9H6J7 331 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 JPH1Q9HDC5 661 aaPredicted RBP13.5□□□□□ -0.25
PCNA-201ENST00000379143 PHF24Q9UPV7 400 aa13.5□□□□□ -0.25
PCNA-201ENST00000379143 MYADML2A6NDP7 307 aa13.49□□□□□ -0.25
PCNA-201ENST00000379143 KIF28PB7ZC32 967 aa13.49□□□□□ -0.25
PCNA-201ENST00000379143 MSH4O15457 936 aa13.49□□□□□ -0.25
PCNA-201ENST00000379143 BAG4O95429 457 aaKnown RBP13.49□□□□□ -0.25
PCNA-201ENST00000379143 COL6A1P12109 1028 aa13.49□□□□□ -0.25
PCNA-201ENST00000379143 PTGS1P23219 599 aa13.49□□□□□ -0.25
PCNA-201ENST00000379143 ANP32AP39687 249 aaKnown RBP13.49□□□□□ -0.25
PCNA-201ENST00000379143 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
PCNA-201ENST00000379143 RILPL1Q5EBL4 403 aa13.49□□□□□ -0.25
PCNA-201ENST00000379143 UBE2Q1Q7Z7E8 422 aa13.49□□□□□ -0.25
PCNA-201ENST00000379143 PAWRQ96IZ0 340 aaKnown RBP13.49□□□□□ -0.25
PCNA-201ENST00000379143 SEZ6LQ9BYH1 1024 aa13.49□□□□□ -0.25
PCNA-201ENST00000379143 PKD2L1Q9P0L9 805 aa13.49□□□□□ -0.25
PCNA-201ENST00000379143 SLC9A2Q9UBY0 812 aa13.49□□□□□ -0.25
PCNA-201ENST00000379143 ELP1O95163 1332 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 SLC37A4O43826 429 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 MARCH6O60337 910 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 NEMFO60524 1076 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 HOXD8P13378 290 aaPredicted RBP13.48□□□□□ -0.25
PCNA-201ENST00000379143 PURAQ00577 322 aaKnown RBP13.48□□□□□ -0.25
PCNA-201ENST00000379143 KRT76Q01546 638 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 ITGB3BPQ13352 177 aaPredicted RBP13.48□□□□□ -0.25
PCNA-201ENST00000379143 LRCH2Q5VUJ6 765 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 SLFN12Q8IYM2 578 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 ETNPPLQ8TBG4 499 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 SEPT1Q8WYJ6 367 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 SLC5A5Q92911 643 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 GPR20Q99678 358 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 MTG1Q9BT17 334 aaPredicted RBP13.48□□□□□ -0.25
PCNA-201ENST00000379143 TEKT3Q9BXF9 490 aa13.48□□□□□ -0.25
PCNA-201ENST00000379143 SENP6Q9GZR1 1112 aaPredicted RBP13.48□□□□□ -0.25
PCNA-201ENST00000379143 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
PCNA-201ENST00000379143 A0A1W2PQ45 241 aaPredicted RBP13.47□□□□□ -0.25
PCNA-201ENST00000379143 A0A1W2PQY0 241 aa13.47□□□□□ -0.25
PCNA-201ENST00000379143 DHX15O43143 795 aaKnown RBP13.47□□□□□ -0.25
PCNA-201ENST00000379143 SORBS3O60504 671 aa13.47□□□□□ -0.25
PCNA-201ENST00000379143 GAS7O60861 476 aa13.47□□□□□ -0.25
PCNA-201ENST00000379143 MYL3P08590 195 aa13.47□□□□□ -0.25
PCNA-201ENST00000379143 ATP2B1P20020 1258 aa13.47□□□□□ -0.25
PCNA-201ENST00000379143 IRX5P78411 483 aaPredicted RBP13.47□□□□□ -0.25
PCNA-201ENST00000379143 CALCRLQ16602 461 aa13.47□□□□□ -0.25
PCNA-201ENST00000379143 TTC38Q5R3I4 469 aa13.47□□□□□ -0.25
PCNA-201ENST00000379143 ZNF746Q6NUN9 644 aaPredicted RBP13.47□□□□□ -0.25
PCNA-201ENST00000379143 CXCL17Q6UXB2 119 aa13.47□□□□□ -0.25
PCNA-201ENST00000379143 SMAP1Q8IYB5 467 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms