RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PLEKHG4Q58EX7 1191 aa20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 TCEAL5Q5H9L2 206 aa20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 BANK1Q8NDB2 785 aa20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 KRT23Q9C075 422 aa20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 BCAS3Q9H6U6 928 aa20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 CTNNA3Q9UI47 895 aa20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 GRXCR2A6NFK2 248 aa20.63■□□□□ 0.89
PDLIM4-202ENST00000379018 H3BRB1 525 aa20.63■□□□□ 0.89
PDLIM4-202ENST00000379018 SP4Q02446 784 aa20.63■□□□□ 0.89
PDLIM4-202ENST00000379018 ALYREFQ86V81 257 aaKnown RBP20.63■□□□□ 0.89
PDLIM4-202ENST00000379018 VSIG10LQ86VR7 867 aa20.63■□□□□ 0.89
PDLIM4-202ENST00000379018 TICAM2Q86XR7 235 aa20.63■□□□□ 0.89
PDLIM4-202ENST00000379018 SP7Q8TDD2 431 aaPredicted RBP20.63■□□□□ 0.89
PDLIM4-202ENST00000379018 IFIH1Q9BYX4 1025 aaKnown RBP20.63■□□□□ 0.89
PDLIM4-202ENST00000379018 TUT1Q9H6E5 874 aaKnown RBP20.63■□□□□ 0.89
PDLIM4-202ENST00000379018 PRR33A8MZF0 331 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 GCOM1H8Y6P7 765 aaPredicted RBP20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 POLR2MP0CAP2 368 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 MKRN4PQ13434 485 aaPredicted RBP20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 STOX1Q6ZVD7 989 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 TRIM50Q86XT4 487 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 TMEM192Q8IY95 271 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 PIBF1Q8WXW3 757 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 PIGSQ96S52 555 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 RNPEPQ9H4A4 650 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 SETD4Q9NVD3 440 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 CLDND1Q9NY35 253 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 MAD2L2Q9UI95 211 aa20.62■□□□□ 0.89
PDLIM4-202ENST00000379018 CTNNB1P35222 781 aa20.61■□□□□ 0.89
PDLIM4-202ENST00000379018 CLUL1Q15846 466 aa20.61■□□□□ 0.89
PDLIM4-202ENST00000379018 UTP14CQ5TAP6 766 aaKnown RBP20.61■□□□□ 0.89
PDLIM4-202ENST00000379018 SAMD11Q96NU1 681 aa20.61■□□□□ 0.89
PDLIM4-202ENST00000379018 DSCC1Q9BVC3 393 aa20.61■□□□□ 0.89
PDLIM4-202ENST00000379018 CNNM2Q9H8M5 875 aa20.61■□□□□ 0.89
PDLIM4-202ENST00000379018 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 H3BNC9 293 aa20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 ALADP13716 330 aa20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 NT5C2P49902 561 aa20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 CYB5R4Q7L1T6 521 aa20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 CYFIP1Q7L576 1253 aa20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 PLEKHM2Q8IWE5 1019 aa20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 NEK9Q8TD19 979 aa20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 TOP1MTQ969P6 601 aa20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 NSUN3Q9H649 340 aaKnown RBP20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 RTEL1Q9NZ71 1219 aa20.6■□□□□ 0.89
PDLIM4-202ENST00000379018 TGFB3P10600 412 aa20.59■□□□□ 0.89
PDLIM4-202ENST00000379018 ARHGAP4P98171 946 aa20.59■□□□□ 0.89
PDLIM4-202ENST00000379018 GHRHRQ02643 423 aa20.59■□□□□ 0.89
PDLIM4-202ENST00000379018 PUS10Q3MIT2 529 aaKnown RBP20.59■□□□□ 0.89
PDLIM4-202ENST00000379018 PABPC5Q96DU9 382 aaKnown RBP20.59■□□□□ 0.89
PDLIM4-202ENST00000379018 MTMR8Q96EF0 704 aa20.59■□□□□ 0.89
PDLIM4-202ENST00000379018 MAP3K20Q9NYL2 800 aaKnown RBP20.59■□□□□ 0.89
PDLIM4-202ENST00000379018 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
PDLIM4-202ENST00000379018 KAT6AQ92794 2004 aa20.58■□□□□ 0.89
PDLIM4-202ENST00000379018 DCXO43602 365 aa20.58■□□□□ 0.89
PDLIM4-202ENST00000379018 SEC23AQ15436 765 aa20.58■□□□□ 0.89
PDLIM4-202ENST00000379018 SLC35G1Q2M3R5 365 aa20.58■□□□□ 0.89
PDLIM4-202ENST00000379018 GNPTABQ3T906 1256 aa20.58■□□□□ 0.89
PDLIM4-202ENST00000379018 RPAINQ86UA6 219 aa20.58■□□□□ 0.89
PDLIM4-202ENST00000379018 CHD1LQ86WJ1 897 aa20.58■□□□□ 0.89
PDLIM4-202ENST00000379018 TELO2Q9Y4R8 837 aa20.58■□□□□ 0.89
PDLIM4-202ENST00000379018 RALGAPA2Q2PPJ7 1873 aa20.58■□□□□ 0.88
PDLIM4-202ENST00000379018 ATG2AQ2TAZ0 1938 aa20.57■□□□□ 0.88
PDLIM4-202ENST00000379018 PALM3A6NDB9 673 aaPredicted RBP20.57■□□□□ 0.88
PDLIM4-202ENST00000379018 HIP1O00291 1037 aa20.57■□□□□ 0.88
PDLIM4-202ENST00000379018 GNAT1P11488 350 aa20.57■□□□□ 0.88
PDLIM4-202ENST00000379018 FIBCD1Q8N539 461 aa20.57■□□□□ 0.88
PDLIM4-202ENST00000379018 USP26Q9BXU7 913 aa20.57■□□□□ 0.88
PDLIM4-202ENST00000379018 ZNF215Q9UL58 517 aaPredicted RBP20.57■□□□□ 0.88
PDLIM4-202ENST00000379018 FAM50BQ9Y247 325 aa20.57■□□□□ 0.88
PDLIM4-202ENST00000379018 GHRP10912 638 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 HOXC8P31273 242 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 MRPS9P82933 396 aaKnown RBP20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 ZP2Q05996 745 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 NEDD9Q14511 834 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 GRM4Q14833 912 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 METTL7BQ6UX53 244 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 LMBR1Q8WVP7 490 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 APBB2Q92870 758 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 IL17RAQ96F46 866 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 GPR20Q99678 358 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 IL25Q9H293 177 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 SENP2Q9HC62 589 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 PIEZO1Q92508 2521 aa20.56■□□□□ 0.88
PDLIM4-202ENST00000379018 IFIT3O14879 490 aaKnown RBP20.55■□□□□ 0.88
PDLIM4-202ENST00000379018 CAND2O75155 1236 aa20.55■□□□□ 0.88
PDLIM4-202ENST00000379018 TRDNQ13061 729 aa20.55■□□□□ 0.88
PDLIM4-202ENST00000379018 SEMA3FQ13275 785 aa20.55■□□□□ 0.88
PDLIM4-202ENST00000379018 SAMD3Q8N6K7 520 aa20.55■□□□□ 0.88
PDLIM4-202ENST00000379018 RWDD1Q9H446 243 aaPredicted RBP20.55■□□□□ 0.88
PDLIM4-202ENST00000379018 IGFLR1Q9H665 355 aa20.55■□□□□ 0.88
PDLIM4-202ENST00000379018 TRAF1Q13077 416 aa20.54■□□□□ 0.88
PDLIM4-202ENST00000379018 RUFY4Q6ZNE9 571 aa20.54■□□□□ 0.88
PDLIM4-202ENST00000379018 SMC5Q8IY18 1101 aa20.54■□□□□ 0.88
PDLIM4-202ENST00000379018 RIOX1Q9H6W3 641 aa20.54■□□□□ 0.88
PDLIM4-202ENST00000379018 PNMA6FA0A0J9YX94 578 aa20.53■□□□□ 0.88
PDLIM4-202ENST00000379018 ERICH2A1L162 156 aa20.53■□□□□ 0.88
PDLIM4-202ENST00000379018 SPATA31C2B4DYI2 1134 aa20.53■□□□□ 0.88
PDLIM4-202ENST00000379018 GRM6O15303 877 aa20.53■□□□□ 0.88
PDLIM4-202ENST00000379018 FIBPO43427 364 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms