RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 WDR5P61964 334 aaKnown RBP15.78■□□□□ 0.12
PRPF18-202ENST00000378572 CELF3Q5SZQ8 465 aaKnown RBP15.78■□□□□ 0.12
PRPF18-202ENST00000378572 CNKSR3Q6P9H4 555 aa15.78■□□□□ 0.12
PRPF18-202ENST00000378572 TMCO2Q7Z6W1 182 aaPredicted RBP15.78■□□□□ 0.12
PRPF18-202ENST00000378572 MTMR8Q96EF0 704 aa15.78■□□□□ 0.12
PRPF18-202ENST00000378572 SPTBN5Q9NRC6 3674 aaKnown RBP15.78■□□□□ 0.12
PRPF18-202ENST00000378572 PNMA6FA0A0J9YX94 578 aa15.77■□□□□ 0.12
PRPF18-202ENST00000378572 PARNO95453 639 aaKnown RBP15.77■□□□□ 0.12
PRPF18-202ENST00000378572 FGD1P98174 961 aa15.77■□□□□ 0.12
PRPF18-202ENST00000378572 TAP1Q03518 808 aa15.77■□□□□ 0.12
PRPF18-202ENST00000378572 PTK7Q13308 1070 aa15.77■□□□□ 0.12
PRPF18-202ENST00000378572 GNPTABQ3T906 1256 aa15.77■□□□□ 0.12
PRPF18-202ENST00000378572 FAM117BQ6P1L5 589 aa15.77■□□□□ 0.12
PRPF18-202ENST00000378572 CTCFLQ8NI51 663 aaPredicted RBP15.77■□□□□ 0.12
PRPF18-202ENST00000378572 UHRF1Q96T88 793 aaPredicted RBP15.77■□□□□ 0.12
PRPF18-202ENST00000378572 CHD7Q9P2D1 2997 aa15.77■□□□□ 0.12
PRPF18-202ENST00000378572 LIFRP42702 1097 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 DEFB103AP81534 67 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 ZNF200P98182 395 aaPredicted RBP15.77■□□□□ 0.11
PRPF18-202ENST00000378572 HSDL1Q3SXM5 330 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 MYSM1Q5VVJ2 828 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 NFXL1Q6ZNB6 911 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 VSIG10LQ86VR7 867 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 SAMD3Q8N6K7 520 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 BRF1Q92994 677 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 CUL5Q93034 780 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 INTS4Q96HW7 963 aaKnown RBP15.77■□□□□ 0.11
PRPF18-202ENST00000378572 CTAGE1Q96RT6 745 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 RIOX1Q9H6W3 641 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 SEC63Q9UGP8 760 aaKnown RBP15.77■□□□□ 0.11
PRPF18-202ENST00000378572 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.11
PRPF18-202ENST00000378572 TET1Q8NFU7 2136 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 BAZ2BQ9UIF8 2168 aaKnown RBP15.76■□□□□ 0.11
PRPF18-202ENST00000378572 EPOPA6NHQ4 379 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 SH2B2O14492 632 aaPredicted RBP15.76■□□□□ 0.11
PRPF18-202ENST00000378572 NBNO60934 754 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 PPFIA4O75335 1185 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 RGS20O76081 388 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 THPOP40225 353 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 GHRHRQ02643 423 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 ZNF618Q5T7W0 954 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 KRT40Q6A162 431 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 SGMS1Q86VZ5 419 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 SMARCC2Q8TAQ2 1214 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 IGDCC4Q8TDY8 1250 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 GPKOWQ92917 476 aaPredicted RBP eCLIP15.76■□□□□ 0.11
PRPF18-202ENST00000378572 MYL10Q9BUA6 226 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 LRRC2Q9BYS8 371 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 TPCN1Q9ULQ1 816 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 MTCH2Q9Y6C9 303 aa15.76■□□□□ 0.11
PRPF18-202ENST00000378572 C17orf102A2RUQ5 167 aa15.75■□□□□ 0.11
PRPF18-202ENST00000378572 ARHGEF15O94989 841 aa15.75■□□□□ 0.11
PRPF18-202ENST00000378572 SP4Q02446 784 aa15.75■□□□□ 0.11
PRPF18-202ENST00000378572 TFF2Q03403 129 aa15.75■□□□□ 0.11
PRPF18-202ENST00000378572 IKBKEQ14164 716 aa15.75■□□□□ 0.11
PRPF18-202ENST00000378572 AAK1Q2M2I8 961 aa15.75■□□□□ 0.11
PRPF18-202ENST00000378572 SLC35G1Q2M3R5 365 aa15.75■□□□□ 0.11
PRPF18-202ENST00000378572 RRP36Q96EU6 259 aaKnown RBP15.75■□□□□ 0.11
PRPF18-202ENST00000378572 ZNF274Q96GC6 653 aaPredicted RBP15.75■□□□□ 0.11
PRPF18-202ENST00000378572 LCHNA4D1U4 455 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 HAS3O00219 553 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 CYTH3O43739 400 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 KIF5BP33176 963 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 SP2Q02086 613 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 TROAPQ12815 778 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 ME3Q16798 604 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 ZNF654Q8IZM8 581 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 TMTC2Q8N394 836 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 GDPD5Q8WTR4 605 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 ATP6V0A1Q93050 837 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 WNT8BQ93098 351 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 RTEL1Q9NZ71 1219 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 COL4A4P53420 1690 aaPredicted RBP15.74■□□□□ 0.11
PRPF18-202ENST00000378572 ABHD14A-ACY1A0A1B0GW23 586 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 EFCAB14O75071 495 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 CXCL10P02778 98 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 LGALS2P05162 132 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 HSP90AA1P07900 732 aaKnown RBP15.74■□□□□ 0.11
PRPF18-202ENST00000378572 CTSHP09668 335 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 TGFB3P10600 412 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 RBL2Q08999 1139 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 SPRED2Q7Z698 418 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 LY9Q9HBG7 655 aa15.74■□□□□ 0.11
PRPF18-202ENST00000378572 PTPRSQ13332 1948 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 EMSYQ7Z589 1322 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 CCDC69A6NI79 296 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 RSPH10B2B2RC85 870 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 H3BRB1 525 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 LGR5O75473 907 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 DDAH1O94760 285 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 LARGE1O95461 756 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 RSPH10BP0C881 870 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 SMIM10L2AP0DMW4 78 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 SMIM10L2BP0DMW5 78 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 GRB10Q13322 594 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 NEDD9Q14511 834 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 UTP14CQ5TAP6 766 aaKnown RBP15.73■□□□□ 0.11
PRPF18-202ENST00000378572 CYFIP1Q7L576 1253 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 MYOCDQ8IZQ8 938 aa15.73■□□□□ 0.11
PRPF18-202ENST00000378572 TUT1Q9H6E5 874 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms