RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 CDHR1Q96JP9 859 aa13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 DNM1LO00429 736 aa13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 NOP56O00567 594 aaKnown RBP13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 NKRFO15226 690 aaKnown RBP eCLIP13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 MYL3P08590 195 aa13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 CIITAP33076 1130 aa13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 MCM7P33993 719 aa13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 NEDD9Q14511 834 aa13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 AGO4Q9HCK5 861 aaKnown RBP13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 MYH7BA7E2Y1 1941 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 MAFGO15525 162 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 U2AF2P26368 475 aaKnown RBP eCLIP13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 ACLYP53396 1101 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 LAMC2Q13753 1193 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 MSH4O15457 936 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 MARCH6O60337 910 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 CPT1AP50416 773 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 ZNF174Q15697 407 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 BRDTQ58F21 947 aaPredicted RBP13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 FAM173BQ6P4H8 233 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 METTL7BQ6UX53 244 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 KLHDC9Q8NEP7 349 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 SENP7Q9BQF6 1050 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 SDF4Q9BRK5 362 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 UPF3AQ9H1J1 476 aaKnown RBP13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 Q9Y3F1 56 aa13.29□□□□□ -0.28
DEPDC4-202ENST00000378244 KIAA1217Q5T5P2 1943 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 A6NJR5 290 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 CHMP2AO43633 222 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 STX6O43752 255 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 MMP3P08254 477 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 ZNF286BP0CG31 522 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 PSMC6P62333 389 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 SETQ01105 290 aaPredicted RBP13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 PKP1Q13835 747 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 CCSAPQ6IQ19 270 aaPredicted RBP13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 TRMT1LQ7Z2T5 733 aaKnown RBP13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 NECAB2Q7Z6G3 386 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 PCSK9Q8NBP7 692 aaKnown RBP13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 JPH1Q9HDC5 661 aaPredicted RBP13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 UTP14CQ5TAP6 766 aaKnown RBP13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 TRIM50Q86XT4 487 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 SLC9A2Q9UBY0 812 aa13.28□□□□□ -0.28
DEPDC4-202ENST00000378244 CYP3A7-CYP3A51PA0A087WV96 503 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 A0A1W2PQ45 241 aaPredicted RBP13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 A0A1W2PQY0 241 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 CYP3A7P24462 503 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 ANP32AP39687 249 aaKnown RBP13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 TOB1P50616 345 aaPredicted RBP13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 PPP4R3AQ6IN85 833 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 NIPA1Q7RTP0 329 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 ANKLE1Q8NAG6 615 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 GIMAP8Q8ND71 665 aaPredicted RBP13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 PPTC7Q8NI37 304 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 GLT1D1Q96MS3 346 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 C11orf49Q9H6J7 331 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 STARD7Q9NQZ5 370 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 MTMR6Q9Y217 621 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 SAMM50Q9Y512 469 aa13.27□□□□□ -0.28
DEPDC4-202ENST00000378244 DHX15O43143 795 aaKnown RBP13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 GAS7O60861 476 aa13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 CCNE2O96020 404 aa13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 TCF7P36402 384 aaPredicted RBP13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 PURAQ00577 322 aaKnown RBP13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 DGKDQ16760 1214 aa13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 Q4G0T1 1027 aa13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 TTC38Q5R3I4 469 aa13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 LRCH2Q5VUJ6 765 aa13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 GPR20Q99678 358 aa13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 NOL7Q9UMY1 257 aaKnown RBP13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 PCDHB6Q9Y5E3 794 aa13.27□□□□□ -0.29
DEPDC4-202ENST00000378244 ZEB2O60315 1214 aa13.26□□□□□ -0.29
DEPDC4-202ENST00000378244 NEMFO60524 1076 aa13.26□□□□□ -0.29
DEPDC4-202ENST00000378244 GCFC2P16383 781 aaKnown RBP13.26□□□□□ -0.29
DEPDC4-202ENST00000378244 CST5P28325 142 aaPredicted RBP13.26□□□□□ -0.29
DEPDC4-202ENST00000378244 EMID1Q96A84 441 aaPredicted RBP13.26□□□□□ -0.29
DEPDC4-202ENST00000378244 TCEAL9Q9UHQ7 104 aa13.26□□□□□ -0.29
DEPDC4-202ENST00000378244 MOXD2PA6NHM9 499 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 PPFIA4O75335 1185 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 COL6A1P12109 1028 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 TXKP42681 527 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 ACTR2P61160 394 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 FAM47CQ5HY64 1035 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 MOXD1Q6UVY6 613 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 ETNPPLQ8TBG4 499 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 HAS1Q92839 578 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 MBOAT7Q96N66 472 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 TMEM60Q9H2L4 133 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 TBC1D22BQ9NU19 505 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 PHF24Q9UPV7 400 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 CEP290O15078 2479 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 MARK3P27448 753 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 CEBPZQ03701 1054 aaKnown RBP13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 CALCRLQ16602 461 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 UBE2Q1Q7Z7E8 422 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms