RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 FBXW4P57775 412 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 NFX1Q12986 1120 aaKnown RBP12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 HVCN1Q96D96 273 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 ADPGKQ9BRR6 497 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 AP1M1Q9BXS5 423 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 MAGEF1Q9HAY2 307 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 IQCA1LA6NCM1 817 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 CLIC2O15247 247 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 NR5A1Q13285 461 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 RTKN2Q8IZC4 609 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 PRAMEF22A3QJZ6 481 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 AGRPO00253 132 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 EIF4A3P38919 411 aaKnown RBP12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 MFAP3P55082 362 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 MRPS25P82663 173 aaKnown RBP12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 RBBP5Q15291 538 aaKnown RBP12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 ABCB5Q2M3G0 1257 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 PCDHB4Q9Y5E5 795 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 SOS2Q07890 1332 aaPredicted RBP12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 DISP1Q96F81 1524 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 H7C0C1 242 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 SH2B2O14492 632 aaPredicted RBP12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 NR2F2P24468 414 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 ATP5OP48047 213 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 ACTR5Q9H9F9 607 aaPredicted RBP12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 TBK1Q9UHD2 729 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 DAAM1Q9Y4D1 1078 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 PCDHB6Q9Y5E3 794 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 ATP10AO60312 1499 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 SPECC1L-ADORA2AF8WAN1 911 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 RINT1Q6NUQ1 792 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 NOVA2Q9UNW9 492 aaKnown RBP12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 TTC37Q6PGP7 1564 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 GFPT2O94808 682 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 NSFP46459 744 aaKnown RBP12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 UBE3CQ15386 1083 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 TRIP13Q15645 432 aaPredicted RBP12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 MMEL1Q495T6 779 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 NME8Q8N427 588 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 ANKRD65E5RJM6 399 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 LAD1O00515 517 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 PCCAP05165 728 aaPredicted RBP12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 NR1D1P20393 614 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 ATICP31939 592 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 GARSP41250 739 aaKnown RBP12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 SLC12A1Q13621 1099 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 RBM46Q8TBY0 533 aaKnown RBP12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 SPZ1Q9BXG8 430 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 THAP9Q9H5L6 903 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 RCOR1Q9UKL0 485 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 LLGL1Q15334 1064 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 TCP11X2Q5H9J9 407 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 MCTP2Q6DN12 878 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 PANX2Q96RD6 677 aa12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 CACYBPQ9HB71 228 aaKnown RBP12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 TSR3Q9UJK0 312 aaKnown RBP12.98□□□□□ -0.33
PCDHA9-201ENST00000378122 CCDC151A5D8V7 595 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 PGRMC1O00264 195 aaKnown RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 CTNND1O60716 968 aaKnown RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 CIAO1O76071 339 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 GUCY2CP25092 1073 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 ICA1Q05084 483 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 DHX9Q08211 1270 aaKnown RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 MAN2A1Q16706 1144 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 SGO2Q562F6 1265 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 SCYL3Q8IZE3 742 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 HAUS1Q96CS2 278 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 PUS7LQ9H0K6 701 aaKnown RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 FAM49AQ9H0Q0 323 aaPredicted RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 ANAPC5Q9UJX4 755 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 PRKAB2O43741 272 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 LRRN2O75325 713 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 NDUFA10O95299 355 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 INHBAP08476 426 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 MAPK4P31152 587 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 PSMC2P35998 433 aaKnown RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 YAF2Q8IY57 180 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 ELMOD1Q8N336 334 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 POMGNT1Q8WZA1 660 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 SLC7A5P2Q9GIP4 190 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 PCIF1Q9H4Z3 704 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 ATP1A3P13637 1013 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 CDC25AP30304 524 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 POLE2P56282 527 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 KRT33BQ14525 404 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 SLC17A8Q8NDX2 589 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 SPDL1Q96EA4 605 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 LRGUKQ96M69 825 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 CUEDC2Q9H467 287 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 IFT122Q9HBG6 1241 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 PNMA3Q9UL41 463 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 MEIS1O00470 390 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 ABTB1Q969K4 478 aaPredicted RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 SMYD2Q9NRG4 433 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 SART1O43290 800 aaKnown RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 CELF2O95319 508 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms