RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 LRRC38Q5VT99 294 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 NBPF5PQ86XG9 351 aaPredicted RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 PAGE5Q96GU1 130 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC68Q9H2F9 335 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 FAM13AO94988 1023 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 RASEFQ8IZ41 740 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 TMEM174Q8WUU8 243 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 RIPOR2Q9Y4F9 1068 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 KLRF2D3W0D1 207 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 IKQ13123 557 aaPredicted RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 PRR23CQ6ZRP0 262 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 CABP7Q86V35 215 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 MIS18AQ9NYP9 233 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 XPOTO43592 962 aaKnown RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 KRT37O76014 449 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 PDE6AP16499 860 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 NSFP46459 744 aaKnown RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 XIAPP98170 497 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 RASA2Q15283 850 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 ZC3H12AQ5D1E8 599 aaKnown RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 DDX56Q9NY93 547 aaKnown RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 FAM26FQ5R3K3 315 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 MCUR1Q96AQ8 359 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 LRRC39Q96DD0 335 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 SYNGAP1Q96PV0 1343 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 LRRD1A4D1F6 860 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 HARSP12081 509 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 ITIH4Q14624 930 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 KNOP1Q1ED39 458 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 FSCBQ5H9T9 825 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 AGLP35573 1532 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 NLRX1Q86UT6 975 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 SPATA4Q8NEY3 305 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC113Q9H0I3 377 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 TUFT1Q9NNX1 390 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 DBNLQ9UJU6 430 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 LRRC49Q8IUZ0 686 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 ZSWIM4Q9H7M6 989 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 NHEJ1Q9H9Q4 299 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 ADD1P35611 737 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 PSMD3O43242 534 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 RNF8O76064 485 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 RCOR2Q8IZ40 523 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 ODR4Q5SWX8 454 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 TMCO4Q5TGY1 634 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 ADSSL1Q8N142 457 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 NACA2Q9H009 215 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 APOBEC2Q9Y235 224 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 SCRN1Q12765 414 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 MFAP3LO75121 409 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 PDIK1LQ8N165 341 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC87Q9NVE4 849 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 KBTBD4Q9NVX7 518 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 MIGA2Q7L4E1 593 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 ZNF18P17022 549 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 POLD2P49005 469 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 FNTAP49354 379 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 RIN3Q8TB24 985 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 LARP4BQ92615 738 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 GADD45BO75293 160 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 ZRANB2O95218 330 aaKnown RBP eCLIP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 PDCD2Q16342 344 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 SH2B2O14492 632 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 VGLL3A8MV65 326 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 BIN1O00499 593 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 APOA4P06727 396 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 PARP9Q8IXQ6 854 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 E2F5Q15329 346 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 RSPH1Q8WYR4 309 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 PUF60Q9UHX1 559 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 MCM7P33993 719 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 POTEAQ6S8J7 498 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 FKBP9P1Q75LS8 142 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 GSTA5Q7RTV2 222 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 CPLX3Q8WVH0 158 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 TRDMT1O14717 391 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 ATF7P17544 494 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 ALKBH5Q6P6C2 394 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 FNBP1Q96RU3 617 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 DNAJB4Q9UDY4 337 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 SCOCQ9UIL1 159 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 LRRC7Q96NW7 1537 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 FAM83GA6ND36 823 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 GHRP10912 638 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 KAZNQ674X7 775 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 KLHL2O95198 593 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 SAR1AQ9NR31 198 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 DISC1Q9NRI5 854 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 PCDHA13Q9Y5I0 950 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 LRRC8BQ6P9F7 803 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 PNMA1Q8ND90 353 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 LPAR1Q92633 364 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 RBM41Q96IZ5 413 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 PARVGQ9HBI0 331 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 HERC5Q9UII4 1024 aaKnown RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 PPP1R37O75864 691 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 POLR2MP0CAP2 368 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 ZNF330Q9Y3S2 320 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-201ENST00000377861 NEDD4P46934 1319 aa5.35□□□□□ -1.55
PCDH9-201ENST00000377861 PLCB3Q01970 1234 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms