RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ZNF76P36508 570 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 BFSP2Q13515 415 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 TMEM240Q5SV17 173 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 ZNF365Q70YC5 407 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 TRIM22Q8IYM9 498 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 GPRASP2Q96D09 838 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 FAM161BQ96MY7 647 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 C6orf50Q9HD87 102 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 ZBBXA8MT70 800 aa13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 EIF5BO60841 1220 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 SSRP1Q08945 709 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 AP3B2Q13367 1082 aa13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 ZNF697Q5TEC3 545 aa13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 CPLX2Q6PUV4 134 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 OTOP2Q7RTS6 562 aa13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 RPUSD2Q8IZ73 545 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 GIMAP8Q8ND71 665 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 CCDC148Q8NFR7 591 aa13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 GPR20Q99678 358 aa13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 MTIF3Q9H2K0 278 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 VPS54Q9P1Q0 977 aa13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 GTF2IRD1Q9UHL9 959 aa13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 UBIAD1Q9Y5Z9 338 aa13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 DOCK5Q9H7D0 1870 aa13.22□□□□□ -0.29
SMARCE1-203ENST00000377808 H3BRB1 525 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 ATP9AO75110 1047 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 FGBP02675 491 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 IFNAR1P17181 557 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 GNA11P29992 359 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 PKN1Q16512 942 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 GPR153Q6NV75 609 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 C16orf59Q7L2K0 433 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 SESTD1Q86VW0 696 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 TRIM50Q86XT4 487 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 REXO1Q8N1G1 1221 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 SENP7Q9BQF6 1050 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 MXRA8Q9BRK3 442 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 C16orf70Q9BSU1 422 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 FTOQ9C0B1 505 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 TUT1Q9H6E5 874 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 JADE2Q9NQC1 790 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 TELO2Q9Y4R8 837 aa13.21□□□□□ -0.29
SMARCE1-203ENST00000377808 C17orf102A2RUQ5 167 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 HAS3O00219 553 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 KCNA2P16389 499 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 TCF7P36402 384 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 CLK2P49760 499 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 EVCP57679 992 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 NLRP5P59047 1200 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 SMAD3P84022 425 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 ARHGAP4P98171 946 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 ZNF200P98182 395 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 NTRK3Q16288 839 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 CYP2W1Q8TAV3 490 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 CAGE1Q8TC20 777 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 BICD2Q8TD16 824 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 RASGRP4Q8TDF6 673 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 ZNF274Q96GC6 653 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 SDF4Q9BRK5 362 aa13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 SLKQ9H2G2 1235 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 JPH1Q9HDC5 661 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-203ENST00000377808 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 ESYT2A0FGR8 921 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 DDX39AO00148 427 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 IQCF3P0C7M6 154 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 SMIM10L2AP0DMW4 78 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 SMIM10L2BP0DMW5 78 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 MARK3P27448 753 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 SREBF1P36956 1147 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 ANAPC15P60006 121 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 FAM109BQ6ICB4 259 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 TEX2Q8IWB9 1127 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 GLG1Q92896 1179 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 ATP6V0A1Q93050 837 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 UIMC1Q96RL1 719 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 ZMYND12Q9H0C1 365 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 KCNH7Q9NS40 1196 aa13.19□□□□□ -0.3
SMARCE1-203ENST00000377808 GRXCR1A8MXD5 290 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 ADAMTS3O15072 1205 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 MAFGO15525 162 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 CDKL5O76039 1030 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 DEXIO95424 95 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 PFKMP08237 780 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 ARP10275 920 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 ACTN1P12814 892 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 SELPP16109 830 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 RFC2P35250 354 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 AK2P54819 239 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 SCRN1Q12765 414 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 PTK7Q13308 1070 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 ANKRD1Q15327 319 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 LRRC8DQ7L1W4 858 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 PLA2G4DQ86XP0 818 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms