RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 CATIPQ7Z7H3 387 aa22.15■■□□□ 1.14
CBWD3-204ENST00000377349 MAP4K1Q92918 833 aa22.15■■□□□ 1.14
CBWD3-204ENST00000377349 COG5Q9UP83 839 aa22.15■■□□□ 1.14
CBWD3-204ENST00000377349 LOXHD1Q8IVV2 1947 aa22.15■■□□□ 1.14
CBWD3-204ENST00000377349 RALGAPA2Q2PPJ7 1873 aa22.15■■□□□ 1.14
CBWD3-204ENST00000377349 LINC01553A4QN01 128 aa22.14■■□□□ 1.14
CBWD3-204ENST00000377349 LGR5O75473 907 aa22.14■■□□□ 1.14
CBWD3-204ENST00000377349 ERVK-21P61565 698 aa22.14■■□□□ 1.14
CBWD3-204ENST00000377349 IKBKEQ14164 716 aa22.14■■□□□ 1.14
CBWD3-204ENST00000377349 CASC1Q6TDU7 716 aa22.14■■□□□ 1.14
CBWD3-204ENST00000377349 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.14■■□□□ 1.14
CBWD3-204ENST00000377349 INPP4AQ96PE3 977 aaPredicted RBP22.14■■□□□ 1.14
CBWD3-204ENST00000377349 ESYT1Q9BSJ8 1104 aa22.14■■□□□ 1.14
CBWD3-204ENST00000377349 ZBED2Q9BTP6 218 aa22.14■■□□□ 1.14
CBWD3-204ENST00000377349 OSBPL7Q9BZF2 842 aa22.14■■□□□ 1.14
CBWD3-204ENST00000377349 SUGCTQ9HAC7 445 aa22.14■■□□□ 1.14
CBWD3-204ENST00000377349 EFCAB14O75071 495 aa22.14■■□□□ 1.13
CBWD3-204ENST00000377349 LGALS2P05162 132 aa22.14■■□□□ 1.13
CBWD3-204ENST00000377349 ICAM3P32942 547 aa22.14■■□□□ 1.13
CBWD3-204ENST00000377349 NFXL1Q6ZNB6 911 aa22.14■■□□□ 1.13
CBWD3-204ENST00000377349 IGDCC4Q8TDY8 1250 aa22.14■■□□□ 1.13
CBWD3-204ENST00000377349 MYL10Q9BUA6 226 aa22.14■■□□□ 1.13
CBWD3-204ENST00000377349 TELO2Q9Y4R8 837 aa22.14■■□□□ 1.13
CBWD3-204ENST00000377349 H3BRB1 525 aa22.13■■□□□ 1.13
CBWD3-204ENST00000377349 SMIM10L2AP0DMW4 78 aa22.13■■□□□ 1.13
CBWD3-204ENST00000377349 SMIM10L2BP0DMW5 78 aa22.13■■□□□ 1.13
CBWD3-204ENST00000377349 THPOP40225 353 aa22.13■■□□□ 1.13
CBWD3-204ENST00000377349 TRAF1Q13077 416 aa22.13■■□□□ 1.13
CBWD3-204ENST00000377349 MB21D2Q8IYB1 491 aaPredicted RBP22.13■■□□□ 1.13
CBWD3-204ENST00000377349 DBF4BQ8NFT6 615 aa22.13■■□□□ 1.13
CBWD3-204ENST00000377349 TUT1Q9H6E5 874 aaKnown RBP22.13■■□□□ 1.13
CBWD3-204ENST00000377349 MLXIPQ9HAP2 919 aa22.13■■□□□ 1.13
CBWD3-204ENST00000377349 LMCD1Q9NZU5 365 aa22.13■■□□□ 1.13
CBWD3-204ENST00000377349 MTUS1Q9ULD2 1270 aa22.13■■□□□ 1.13
CBWD3-204ENST00000377349 EMSYQ7Z589 1322 aa22.12■■□□□ 1.13
CBWD3-204ENST00000377349 SPATA31C2B4DYI2 1134 aa22.12■■□□□ 1.13
CBWD3-204ENST00000377349 TREHO43280 583 aa22.12■■□□□ 1.13
CBWD3-204ENST00000377349 PRC1O43663 620 aa22.12■■□□□ 1.13
CBWD3-204ENST00000377349 PLEKHG4Q58EX7 1191 aa22.12■■□□□ 1.13
CBWD3-204ENST00000377349 FAM117BQ6P1L5 589 aa22.12■■□□□ 1.13
CBWD3-204ENST00000377349 HLA-CQ95604 372 aa22.12■■□□□ 1.13
CBWD3-204ENST00000377349 TGS1Q96RS0 853 aaKnown RBP22.12■■□□□ 1.13
CBWD3-204ENST00000377349 LSG1Q9H089 658 aaKnown RBP22.12■■□□□ 1.13
CBWD3-204ENST00000377349 RNPEPQ9H4A4 650 aa22.12■■□□□ 1.13
CBWD3-204ENST00000377349 COL4A6Q14031 1691 aa22.11■■□□□ 1.13
CBWD3-204ENST00000377349 C17orf102A2RUQ5 167 aa22.11■■□□□ 1.13
CBWD3-204ENST00000377349 RSPH10B2B2RC85 870 aa22.11■■□□□ 1.13
CBWD3-204ENST00000377349 RSPH10BP0C881 870 aa22.11■■□□□ 1.13
CBWD3-204ENST00000377349 HTRA4P83105 476 aaPredicted RBP22.11■■□□□ 1.13
CBWD3-204ENST00000377349 COL9A3Q14050 684 aaPredicted RBP22.11■■□□□ 1.13
CBWD3-204ENST00000377349 METTL7BQ6UX53 244 aa22.11■■□□□ 1.13
CBWD3-204ENST00000377349 ATP6V0A1Q93050 837 aa22.11■■□□□ 1.13
CBWD3-204ENST00000377349 GPR20Q99678 358 aa22.11■■□□□ 1.13
CBWD3-204ENST00000377349 C5orf42Q9H799 3197 aa22.11■■□□□ 1.13
CBWD3-204ENST00000377349 SLC27A2O14975 620 aa22.1■■□□□ 1.13
CBWD3-204ENST00000377349 TRIM50Q86XT4 487 aa22.1■■□□□ 1.13
CBWD3-204ENST00000377349 SP7Q8TDD2 431 aaPredicted RBP22.1■■□□□ 1.13
CBWD3-204ENST00000377349 LY9Q9HBG7 655 aa22.1■■□□□ 1.13
CBWD3-204ENST00000377349 TTC3P53804 2025 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 CCDC69A6NI79 296 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 MEIS2O14770 477 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 STAM2O75886 525 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 ADAM17P78536 824 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 GNPTABQ3T906 1256 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 CYFIP1Q7L576 1253 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 RAB11FIP4Q86YS3 637 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 CTCFLQ8NI51 663 aaPredicted RBP22.09■■□□□ 1.13
CBWD3-204ENST00000377349 C17orf80Q9BSJ5 609 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 SPZ1Q9BXG8 430 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 RTEL1Q9NZ71 1219 aa22.09■■□□□ 1.13
CBWD3-204ENST00000377349 FIBPO43427 364 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 RXRAP19793 462 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 MCM5P33992 734 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 NEDD9Q14511 834 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 BMP2KLQ5H9B9 411 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 CREB3L3Q68CJ9 461 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 USP17L6PQ6QN14 398 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 ZNF654Q8IZM8 581 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 CCDC136Q96JN2 1154 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 MAP3K14Q99558 947 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 USP26Q9BXU7 913 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 LRRC2Q9BYS8 371 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 INSL6Q9Y581 213 aa22.08■■□□□ 1.13
CBWD3-204ENST00000377349 PIK3CDO00329 1044 aa22.07■■□□□ 1.12
CBWD3-204ENST00000377349 NOP56O00567 594 aaKnown RBP22.07■■□□□ 1.12
CBWD3-204ENST00000377349 PCNX4Q63HM2 1172 aa22.07■■□□□ 1.12
CBWD3-204ENST00000377349 MYOCDQ8IZQ8 938 aa22.07■■□□□ 1.12
CBWD3-204ENST00000377349 SETD4Q9NVD3 440 aa22.07■■□□□ 1.12
CBWD3-204ENST00000377349 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.06■■□□□ 1.12
CBWD3-204ENST00000377349 CAND2O75155 1236 aa22.06■■□□□ 1.12
CBWD3-204ENST00000377349 AMHP03971 560 aa22.06■■□□□ 1.12
CBWD3-204ENST00000377349 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.06■■□□□ 1.12
CBWD3-204ENST00000377349 DDAH1O94760 285 aa22.06■■□□□ 1.12
CBWD3-204ENST00000377349 PLEKHA8P1O95397 391 aa22.06■■□□□ 1.12
CBWD3-204ENST00000377349 CTSHP09668 335 aa22.06■■□□□ 1.12
CBWD3-204ENST00000377349 SMARCA1P28370 1054 aa22.06■■□□□ 1.12
CBWD3-204ENST00000377349 KIF5BP33176 963 aa22.06■■□□□ 1.12
CBWD3-204ENST00000377349 KHSRPQ92945 711 aaKnown RBP eCLIP22.06■■□□□ 1.12
CBWD3-204ENST00000377349 SENP7Q9BQF6 1050 aa22.06■■□□□ 1.12
CBWD3-204ENST00000377349 EPHX3Q9H6B9 360 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms