RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ZSCAN5CA6NGD5 496 aaPredicted RBP14.26□□□□□ -0.13
USP11-204ENST00000377107 ZBTB5O15062 677 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 CLSTN1O94985 981 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 CERKLQ49MI3 558 aaPredicted RBP14.26□□□□□ -0.13
USP11-204ENST00000377107 MTMR9Q96QG7 549 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 BCAS3Q9H6U6 928 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 SALL4Q9UJQ4 1053 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 PLAGL2Q9UPG8 496 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 DDX60Q8IY21 1712 aaKnown RBP14.26□□□□□ -0.13
USP11-204ENST00000377107 CFBP00751 764 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 ACTN2P35609 894 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 PSMC6P62333 389 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 PRPF4BQ13523 1007 aaKnown RBP14.26□□□□□ -0.13
USP11-204ENST00000377107 CDC37Q16543 378 aaPredicted RBP14.26□□□□□ -0.13
USP11-204ENST00000377107 CDC42EP5Q6NZY7 148 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 SPATA4Q8NEY3 305 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 TAF4BQ92750 862 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 MTMR8Q96EF0 704 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 ERGIC2Q96RQ1 377 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 PACSIN1Q9BY11 444 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 SNX12Q9UMY4 172 aa14.26□□□□□ -0.13
USP11-204ENST00000377107 CETN3O15182 167 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 PALMO75781 387 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 GCNT3O95395 438 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 ATP1A2P50993 1020 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 MEA1Q16626 185 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 HNRNPLLQ8WVV9 542 aaKnown RBP14.25□□□□□ -0.13
USP11-204ENST00000377107 HAS1Q92839 578 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 IKZF4Q9H2S9 585 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 LCMT1Q9UIC8 334 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 HYOU1Q9Y4L1 999 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 GOLGA6CA6NDK9 693 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 DDX39AO00148 427 aaKnown RBP14.25□□□□□ -0.13
USP11-204ENST00000377107 ZEB2O60315 1214 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 GOLGA6DP0CG33 693 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 MCM3P25205 808 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 GUCY2DQ02846 1103 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 ADAT2Q7Z6V5 191 aaKnown RBP14.25□□□□□ -0.13
USP11-204ENST00000377107 TPH2Q8IWU9 490 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 FAM71BQ8TC56 605 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 ANO3Q9BYT9 981 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 TTYH3Q9C0H2 523 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 SH2D4AQ9H788 454 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 GOLGA6AQ9NYA3 693 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 ROBO1Q9Y6N7 1651 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 PVALEFA0A1B0GWK0 134 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 PPP1R2P41236 205 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 DDR1Q08345 913 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 PAPD7Q5XG87 772 aaKnown RBP14.25□□□□□ -0.13
USP11-204ENST00000377107 CCDC174Q6PII3 467 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 KSR1Q8IVT5 923 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 CYP2W1Q8TAV3 490 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 KRT12Q99456 494 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 LRRC27Q9C0I9 530 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 RGL1Q9NZL6 768 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 DOCK2Q92608 1830 aa14.25□□□□□ -0.13
USP11-204ENST00000377107 ICA1Q05084 483 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 LRRC63Q05C16 580 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 ASIC2Q16515 512 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 BHMT2Q9H2M3 363 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 RIC8AQ9NPQ8 531 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 RBM12Q9NTZ6 932 aaKnown RBP14.24□□□□□ -0.13
USP11-204ENST00000377107 BCCIPQ9P287 314 aaKnown RBP eCLIP14.24□□□□□ -0.13
USP11-204ENST00000377107 SCAF8Q9UPN6 1271 aaKnown RBP14.24□□□□□ -0.13
USP11-204ENST00000377107 SIK3Q9Y2K2 1263 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 BCORQ6W2J9 1755 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 RSPH10B2B2RC85 870 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 TBCAO75347 108 aaKnown RBP14.24□□□□□ -0.13
USP11-204ENST00000377107 RSPH10BP0C881 870 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 SLC9A1P19634 815 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 FECHP22830 423 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 TUBB4BP68371 445 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 IRX5P78411 483 aaPredicted RBP14.24□□□□□ -0.13
USP11-204ENST00000377107 SFR1Q86XK3 245 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 EPB41L5Q9HCM4 733 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 LUC7LQ9NQ29 371 aaKnown RBP14.24□□□□□ -0.13
USP11-204ENST00000377107 ZBTB21Q9ULJ3 1066 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 KCNK3O14649 394 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 MED24O75448 989 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 PDXDC1Q6P996 788 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 HPCAL4Q9UM19 191 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 NFU1Q9UMS0 254 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 DNM3Q9UQ16 869 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 STRCQ7RTU9 1775 aa14.24□□□□□ -0.13
USP11-204ENST00000377107 SNED1Q8TER0 1413 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 IL1R1P14778 569 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 SHMT1P34896 483 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 FXR2P51116 673 aaKnown RBP eCLIP14.23□□□□□ -0.13
USP11-204ENST00000377107 KCNH2Q12809 1159 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 CTTNQ14247 550 aaKnown RBP14.23□□□□□ -0.13
USP11-204ENST00000377107 NAA35Q5VZE5 725 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 CCNI2Q6ZMN8 369 aaPredicted RBP14.23□□□□□ -0.13
USP11-204ENST00000377107 MAATS1Q7Z4T9 603 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 FAM76AQ8TAV0 307 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 TRIM31Q9BZY9 425 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 MYH10P35580 1976 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 CEP104O60308 925 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 KLRC1P26715 233 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 CASP5P51878 434 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 GJB7Q6PEY0 223 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms