RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 CYP2C18P33260 490 aa17.59■□□□□ 0.41
APOA1-205ENST00000375329 ZNF76P36508 570 aa17.59■□□□□ 0.41
APOA1-205ENST00000375329 SEMA3FQ13275 785 aa17.59■□□□□ 0.41
APOA1-205ENST00000375329 PKN1Q16512 942 aa17.59■□□□□ 0.41
APOA1-205ENST00000375329 PTGISQ16647 500 aa17.59■□□□□ 0.41
APOA1-205ENST00000375329 KIAA0753Q2KHM9 967 aa17.59■□□□□ 0.41
APOA1-205ENST00000375329 PSRC1Q6PGN9 363 aaPredicted RBP17.59■□□□□ 0.41
APOA1-205ENST00000375329 REXO1Q8N1G1 1221 aaKnown RBP17.59■□□□□ 0.41
APOA1-205ENST00000375329 RETREG2Q8NC44 543 aa17.59■□□□□ 0.41
APOA1-205ENST00000375329 MXRA8Q9BRK3 442 aa17.59■□□□□ 0.41
APOA1-205ENST00000375329 SLKQ9H2G2 1235 aaPredicted RBP17.59■□□□□ 0.41
APOA1-205ENST00000375329 MTIF3Q9H2K0 278 aaKnown RBP17.59■□□□□ 0.41
APOA1-205ENST00000375329 ZNF215Q9UL58 517 aaPredicted RBP17.59■□□□□ 0.41
APOA1-205ENST00000375329 HAS3O00219 553 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 PITPNM1O00562 1244 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 SORBS3O60504 671 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 CD2BP2O95400 341 aaKnown RBP17.58■□□□□ 0.4
APOA1-205ENST00000375329 DEXIO95424 95 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 ZNF286BP0CG31 522 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 ITGB5P18084 799 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 SREBF1P36956 1147 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 CLK2P49760 499 aaKnown RBP17.58■□□□□ 0.4
APOA1-205ENST00000375329 CEP55Q53EZ4 464 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 CAGE1Q8TC20 777 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 RNPC3Q96LT9 517 aaKnown RBP17.58■□□□□ 0.4
APOA1-205ENST00000375329 ALG1Q9BT22 464 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 IL23AQ9NPF7 189 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 GTF2IRD1Q9UHL9 959 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 TRIP12Q14669 1992 aaPredicted RBP17.58■□□□□ 0.4
APOA1-205ENST00000375329 DOCK5Q9H7D0 1870 aa17.58■□□□□ 0.4
APOA1-205ENST00000375329 H3BRB1 525 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 LGALS2P05162 132 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 PFKMP08237 780 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 CYP2C9P11712 490 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 CSF2RAP15509 400 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 RFC2P35250 354 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 STK3Q13188 491 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 C9orf50Q5SZB4 431 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 JAKMIP3Q5VZ66 844 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 NIPA1Q7RTP0 329 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 GPR20Q99678 358 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 TUT1Q9H6E5 874 aaKnown RBP17.57■□□□□ 0.4
APOA1-205ENST00000375329 HDAC6Q9UBN7 1215 aa17.57■□□□□ 0.4
APOA1-205ENST00000375329 RBM19Q9Y4C8 960 aaKnown RBP17.57■□□□□ 0.4
APOA1-205ENST00000375329 SOX1O00570 391 aaPredicted RBP17.56■□□□□ 0.4
APOA1-205ENST00000375329 PARNO95453 639 aaKnown RBP17.56■□□□□ 0.4
APOA1-205ENST00000375329 GNAT1P11488 350 aa17.56■□□□□ 0.4
APOA1-205ENST00000375329 KCNA2P16389 499 aa17.56■□□□□ 0.4
APOA1-205ENST00000375329 CCL23P55773 120 aa17.56■□□□□ 0.4
APOA1-205ENST00000375329 ARHGAP4P98171 946 aa17.56■□□□□ 0.4
APOA1-205ENST00000375329 GALNT17Q6IS24 598 aa17.56■□□□□ 0.4
APOA1-205ENST00000375329 SEPT1Q8WYJ6 367 aa17.56■□□□□ 0.4
APOA1-205ENST00000375329 SDF4Q9BRK5 362 aa17.56■□□□□ 0.4
APOA1-205ENST00000375329 C16orf70Q9BSU1 422 aa17.56■□□□□ 0.4
APOA1-205ENST00000375329 KCNH7Q9NS40 1196 aa17.56■□□□□ 0.4
APOA1-205ENST00000375329 TMEM260Q9NX78 707 aa17.56■□□□□ 0.4
APOA1-205ENST00000375329 LAMA3Q16787 3333 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 NFASCO94856 1347 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 MEIS1O00470 390 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 PFKFB2O60825 505 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 FGBP02675 491 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 CYP3A4P08684 503 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 XBP1P17861 261 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 EPHB4P54760 987 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 NLRP5P59047 1200 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 SMAD3P84022 425 aaKnown RBP17.55■□□□□ 0.4
APOA1-205ENST00000375329 TMEM240Q5SV17 173 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 GDF6Q6KF10 455 aaPredicted RBP17.55■□□□□ 0.4
APOA1-205ENST00000375329 AFAP1L1Q8TED9 768 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 LRCH3Q96II8 777 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 PGBD1Q96JS3 809 aa17.55■□□□□ 0.4
APOA1-205ENST00000375329 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.55■□□□□ 0.4
APOA1-205ENST00000375329 ATP9AO75110 1047 aa17.54■□□□□ 0.4
APOA1-205ENST00000375329 SETQ01105 290 aaPredicted RBP17.54■□□□□ 0.4
APOA1-205ENST00000375329 SP4Q02446 784 aa17.54■□□□□ 0.4
APOA1-205ENST00000375329 PTK7Q13308 1070 aa17.54■□□□□ 0.4
APOA1-205ENST00000375329 ZNF365Q70YC5 407 aa17.54■□□□□ 0.4
APOA1-205ENST00000375329 TNPO1Q92973 898 aaKnown RBP17.54■□□□□ 0.4
APOA1-205ENST00000375329 WNT8AQ9H1J5 351 aa17.54■□□□□ 0.4
APOA1-205ENST00000375329 BCAS3Q9H6U6 928 aa17.54■□□□□ 0.4
APOA1-205ENST00000375329 JPH1Q9HDC5 661 aaPredicted RBP17.54■□□□□ 0.4
APOA1-205ENST00000375329 VPS54Q9P1Q0 977 aa17.54■□□□□ 0.4
APOA1-205ENST00000375329 SLC9A2Q9UBY0 812 aa17.54■□□□□ 0.4
APOA1-205ENST00000375329 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
APOA1-205ENST00000375329 UMODL1Q5DID0 1318 aa17.53■□□□□ 0.4
APOA1-205ENST00000375329 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.53■□□□□ 0.4
APOA1-205ENST00000375329 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.53■□□□□ 0.4
APOA1-205ENST00000375329 C17orf102A2RUQ5 167 aa17.53■□□□□ 0.4
APOA1-205ENST00000375329 PPFIA3O75145 1194 aa17.53■□□□□ 0.4
APOA1-205ENST00000375329 LARGE1O95461 756 aa17.53■□□□□ 0.4
APOA1-205ENST00000375329 TCF7P36402 384 aaPredicted RBP17.53■□□□□ 0.4
APOA1-205ENST00000375329 UTP14CQ5TAP6 766 aaKnown RBP17.53■□□□□ 0.4
APOA1-205ENST00000375329 FAM109BQ6ICB4 259 aaPredicted RBP17.53■□□□□ 0.4
APOA1-205ENST00000375329 SLC17A8Q8NDX2 589 aa17.53■□□□□ 0.4
APOA1-205ENST00000375329 WASF1Q92558 559 aa17.53■□□□□ 0.4
APOA1-205ENST00000375329 SMARCAD1Q9H4L7 1026 aa17.53■□□□□ 0.4
APOA1-205ENST00000375329 PKD2L1Q9P0L9 805 aa17.53■□□□□ 0.4
APOA1-205ENST00000375329 TPCN1Q9ULQ1 816 aa17.53■□□□□ 0.4
APOA1-205ENST00000375329 STK36Q9NRP7 1315 aa17.52■□□□□ 0.4
APOA1-205ENST00000375329 IQCF3P0C7M6 154 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms