RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 RAPGEF1Q13905 1077 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 SIAH1Q8IUQ4 282 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 MSANTD4Q8NCY6 345 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 RGL1Q9NZL6 768 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.87■□□□□ 0.61
RXRB-201ENST00000374680 SWAP70Q9UH65 585 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 ZBTB39O15060 712 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 PRPF6O94906 941 aaKnown RBP18.87■□□□□ 0.61
RXRB-201ENST00000374680 APBA3O96018 575 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 ZNF76P36508 570 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 EPS15P42566 896 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 AOC3Q16853 763 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 TCERG1LQ5VWI1 586 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 MS4A14Q96JA4 679 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 USO1O60763 962 aaKnown RBP18.87■□□□□ 0.61
RXRB-201ENST00000374680 NPR1P16066 1061 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 CLK2P49760 499 aaKnown RBP18.87■□□□□ 0.61
RXRB-201ENST00000374680 ADAM9Q13443 819 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 TMEM119Q4V9L6 283 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 PPP4R3AQ6IN85 833 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 RETREG2Q8NC44 543 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 PIGOQ8TEQ8 1089 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 EMILIN3Q9NT22 766 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 COL4A3BPQ9Y5P4 624 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 TCP10L2B9ZVM9 353 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 CLIC2O15247 247 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 ARHGAP4P98171 946 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 FKBP3Q00688 224 aaKnown RBP18.86■□□□□ 0.61
RXRB-201ENST00000374680 PPARDQ03181 441 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.86■□□□□ 0.61
RXRB-201ENST00000374680 CCDC84Q86UT8 332 aaPredicted RBP18.86■□□□□ 0.61
RXRB-201ENST00000374680 CCDC170Q8IYT3 715 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 RAB21Q9UL25 225 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.86■□□□□ 0.61
RXRB-201ENST00000374680 CYP2C19P33261 490 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 HNRNPH2P55795 449 aaKnown RBP18.86■□□□□ 0.61
RXRB-201ENST00000374680 KCNA1Q09470 495 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 CATSPER3Q86XQ3 398 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 KSR1Q8IVT5 923 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 GOLPH3Q9H4A6 298 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 MAST2Q6P0Q8 1798 aa18.86■□□□□ 0.61
RXRB-201ENST00000374680 FAM86B1E9PN63 330 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 MAP2K7O14733 419 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 MEIS2O14770 477 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 FAM86B2P0C5J1 330 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 CYP11B2P19099 503 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 ECE1P42892 770 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 USP14P54578 494 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 RRP1BQ14684 758 aaKnown RBP18.85■□□□□ 0.61
RXRB-201ENST00000374680 ARSHQ5FYA8 562 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 DCAF17Q5H9S7 520 aaPredicted RBP18.85■□□□□ 0.61
RXRB-201ENST00000374680 CCDC174Q6PII3 467 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 FAM133AQ8N9E0 248 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 SCFD1Q8WVM8 642 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 PKD2L1Q9P0L9 805 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 ECE2O60344 883 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 TACC1O75410 805 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 NDUFB10O96000 172 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 CFBP00751 764 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 CCDC65Q8IXS2 484 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 ADAMTS1Q9UHI8 967 aa18.85■□□□□ 0.61
RXRB-201ENST00000374680 FTCDO95954 541 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 NT5C2P49902 561 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 ABCB5Q2M3G0 1257 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 FAM83BQ5T0W9 1011 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 BAP1Q92560 729 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 MTMR8Q96EF0 704 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 PI4KBQ9UBF8 816 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 BCS1LQ9Y276 419 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 SPDYE3A6NKU9 549 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 ZBTB22O15209 634 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 FGFR1OPO95684 399 aaKnown RBP18.84■□□□□ 0.61
RXRB-201ENST00000374680 ALDH1B1P30837 517 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 LRRC63Q05C16 580 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 PAPD7Q5XG87 772 aaKnown RBP18.84■□□□□ 0.61
RXRB-201ENST00000374680 NLGN1Q8N2Q7 840 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 PROCA1Q8NCQ7 364 aaPredicted RBP18.84■□□□□ 0.61
RXRB-201ENST00000374680 PRMT6Q96LA8 375 aaPredicted RBP18.84■□□□□ 0.61
RXRB-201ENST00000374680 PACSIN1Q9BY11 444 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 CDK5RAP2Q96SN8 1893 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 POTEB2H3BUK9 544 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 ATP8B1O43520 1251 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 NR2F2P24468 414 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 CTTNQ14247 550 aaKnown RBP18.84■□□□□ 0.61
RXRB-201ENST00000374680 PLS1Q14651 629 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 SLC27A3Q5K4L6 730 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 HHIPL2Q6UWX4 724 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 SFR1Q86XK3 245 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 LRRC1Q9BTT6 524 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 BHMT2Q9H2M3 363 aa18.84■□□□□ 0.61
RXRB-201ENST00000374680 DMGDHQ9UI17 866 aaKnown RBP18.84■□□□□ 0.61
RXRB-201ENST00000374680 A0A0U1RQG5 324 aaPredicted RBP18.83■□□□□ 0.61
RXRB-201ENST00000374680 A0A1W2PRG0 241 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 hCG_1984214I3L0E3 225 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 TLR2O60603 784 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 SLC9A1P19634 815 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 POLD1P28340 1107 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 TUBB2AQ13885 445 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 HSP90B2PQ58FF3 399 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 CCDC181Q5TID7 509 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms