RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 HGSNATQ68CP4 663 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-204ENST00000374346 ANKRD13CQ8N6S4 541 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 NUDT12Q9BQG2 462 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 LSM14BQ9BX40 385 aaKnown RBP12.57□□□□□ -0.4
PTPN20-204ENST00000374346 TLR10Q9BXR5 811 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 JMJD4Q9H9V9 463 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 SERPINB13Q9UIV8 391 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 ATAD5Q96QE3 1844 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 EPB41P11171 864 aaKnown RBP12.57□□□□□ -0.4
PTPN20-204ENST00000374346 ERCC3P19447 782 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 POLR2FP61218 127 aaKnown RBP12.57□□□□□ -0.4
PTPN20-204ENST00000374346 NAB2Q15742 525 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 HERC4Q5GLZ8 1057 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-204ENST00000374346 HAUS3Q68CZ6 603 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 KCNK18Q7Z418 384 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 CERKQ8TCT0 537 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 HDAC7Q8WUI4 952 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPN20-204ENST00000374346 C10orf71Q711Q0 1435 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 CETN3O15182 167 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 EIF6P56537 245 aaKnown RBP12.56□□□□□ -0.4
PTPN20-204ENST00000374346 SLC7A5Q01650 507 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 ATP2B2Q01814 1243 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 GABPAQ06546 454 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 IFI16Q16666 785 aaKnown RBP12.56□□□□□ -0.4
PTPN20-204ENST00000374346 UBE2SQ16763 222 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 EDRF1Q3B7T1 1238 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 CRY2Q49AN0 593 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 SLFN12Q8IYM2 578 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 HAS1Q92839 578 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 MTMR8Q96EF0 704 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 SH3GL2Q99962 352 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 CAPS2Q9BXY5 557 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 EMILIN3Q9NT22 766 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 PODXL2Q9NZ53 605 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 LCMT1Q9UIC8 334 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 KIAA1024Q9UPX6 916 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 IGKV6D-41A0A0C4DH26 115 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 SHTN1A0MZ66 631 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 PLA2G4BP0C869 781 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 AKR1B1P15121 316 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 ADRA2BP18089 450 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 MAGEA9P43362 315 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 USP11P51784 963 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 KLHL30Q0D2K2 578 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 PAK2Q13177 524 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 ADAM9Q13443 819 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 RAPGEF1Q13905 1077 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 EZH2Q15910 746 aaKnown RBP12.56□□□□□ -0.4
PTPN20-204ENST00000374346 PRR5LQ6MZQ0 368 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 RBM12Q9NTZ6 932 aaKnown RBP12.56□□□□□ -0.4
PTPN20-204ENST00000374346 DAGLAQ9Y4D2 1042 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 STK24Q9Y6E0 443 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 BZW2Q9Y6E2 419 aaKnown RBP12.56□□□□□ -0.4
PTPN20-204ENST00000374346 PITPNM2Q9BZ72 1349 aa12.56□□□□□ -0.4
PTPN20-204ENST00000374346 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 NCK2O43639 380 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 PALMO75781 387 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 HLA-DOAP06340 250 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 ASIC2Q16515 512 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 KIAA0753Q2KHM9 967 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 PTF1AQ7RTS3 328 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 GPBP1Q86WP2 473 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 TRIM59Q8IWR1 403 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 ERMNQ8TAM6 284 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 TBC1D5Q92609 795 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 TAF4BQ92750 862 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 AIPL1Q9NZN9 384 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 SALL4Q9UJQ4 1053 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 MYH4Q9Y623 1939 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 TRIM66O15016 1216 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 EDIL3O43854 480 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 NOL4O94818 638 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 ECM1Q16610 540 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 MCTP2Q6DN12 878 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 NELFCDQ8IXH7 590 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 GLIS3Q8NEA6 775 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 TBC1D16Q8TBP0 767 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 PPM1EQ8WY54 764 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTPN20-204ENST00000374346 NGLY1Q96IV0 654 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 TBC1D7Q9P0N9 293 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 PCDHGC5Q9Y5F6 944 aa12.55□□□□□ -0.4
PTPN20-204ENST00000374346 EBAG9O00559 213 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 TNNC1P63316 161 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 FOXR1Q6PIV2 292 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 TMC4Q7Z404 712 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 HINFPQ9BQA5 517 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 E9PMD0 336 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 MPHOSPH10O00566 681 aaKnown RBP12.54□□□□□ -0.4
PTPN20-204ENST00000374346 CES2O00748 559 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 IRAK1P51617 712 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 CORO7P57737 925 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 GTF2IP78347 998 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 MEI1Q5TIA1 1274 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 AMIGO3Q86WK7 504 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 EFCAB13Q8IY85 973 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 SPAG5Q96R06 1193 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms