RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 FAM47CQ5HY64 1035 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 TMEM31Q5JXX7 168 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 CPLX2Q6PUV4 134 aaKnown RBP8.9□□□□□ -0.98
SP140-202ENST00000373645 SLC30A10Q6XR72 485 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 RAB11FIP4Q86YS3 637 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 HERC6Q8IVU3 1022 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 RPUSD2Q8IZ73 545 aaKnown RBP8.9□□□□□ -0.98
SP140-202ENST00000373645 MORC4Q8TE76 937 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 GTF3C6Q969F1 213 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 GMCL1Q96IK5 515 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 CTAGE1Q96RT6 745 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 LLPHQ9BRT6 129 aaKnown RBP8.9□□□□□ -0.98
SP140-202ENST00000373645 NCOA5Q9HCD5 579 aaKnown RBP8.9□□□□□ -0.98
SP140-202ENST00000373645 VTA1Q9NP79 307 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 FAM217BQ9NTX9 383 aaPredicted RBP8.9□□□□□ -0.98
SP140-202ENST00000373645 MTUS1Q9ULD2 1270 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 CCPG1Q9ULG6 757 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 PCDHB8Q9UN66 801 aa8.9□□□□□ -0.98
SP140-202ENST00000373645 NID2Q14112 1375 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 PALM3A6NDB9 673 aaPredicted RBP8.89□□□□□ -0.99
SP140-202ENST00000373645 ZEB2O60315 1214 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 PARP1P09874 1014 aaKnown RBP8.89□□□□□ -0.99
SP140-202ENST00000373645 IQCF3P0C7M6 154 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 SNHG28P0DPA3 235 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 PDHBP11177 359 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 DEFB103AP81534 67 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 ST3GAL1Q11201 340 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 AAK1Q2M2I8 961 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 ASPRV1Q53RT3 343 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 GPATCH4Q5T3I0 446 aaKnown RBP8.89□□□□□ -0.99
SP140-202ENST00000373645 IQSEC1Q6DN90 963 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 FAM160B2Q86V87 743 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 DCAF4Q8WV16 495 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 HLA-CQ95604 372 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 SLC9A7Q96T83 725 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 WDR11Q9BZH6 1224 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 MAD2L2Q9UI95 211 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 HCN4Q9Y3Q4 1203 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 MYO7AQ13402 2215 aa8.89□□□□□ -0.99
SP140-202ENST00000373645 FRMPD2Q68DX3 1309 aaPredicted RBP8.88□□□□□ -0.99
SP140-202ENST00000373645 PTPDC1A2A3K4 754 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 KLRF2D3W0D1 207 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 CDKL5O76039 1030 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 ARIH2O95376 493 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 ICAM1P05362 532 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 PFKMP08237 780 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 IFNAR1P17181 557 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 SMARCA1P28370 1054 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 CHMP4BP1P59074 171 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 SSRP1Q08945 709 aaKnown RBP8.88□□□□□ -0.99
SP140-202ENST00000373645 ZNF543Q08ER8 600 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 NTRK3Q16288 839 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 CCDC96Q2M329 555 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 TKFCQ3LXA3 575 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 STAG2Q8N3U4 1231 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 SRBD1Q8N5C6 995 aaKnown RBP8.88□□□□□ -0.99
SP140-202ENST00000373645 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 NSUN7Q8NE18 718 aaKnown RBP8.88□□□□□ -0.99
SP140-202ENST00000373645 OR6J1Q8NGC5 347 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 SMARCC2Q8TAQ2 1214 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 CHURC1Q8WUH1 139 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 DHX38Q92620 1227 aaKnown RBP8.88□□□□□ -0.99
SP140-202ENST00000373645 LZTS2Q9BRK4 669 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 MTG1Q9BT17 334 aaPredicted RBP8.88□□□□□ -0.99
SP140-202ENST00000373645 FTOQ9C0B1 505 aaKnown RBP eCLIP8.88□□□□□ -0.99
SP140-202ENST00000373645 SMC3Q9UQE7 1217 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 Q9Y3F1 56 aa8.88□□□□□ -0.99
SP140-202ENST00000373645 CTDNEP1O95476 244 aa8.87□□□□□ -0.99
SP140-202ENST00000373645 GOLGA8HP0CJ92 632 aa8.87□□□□□ -0.99
SP140-202ENST00000373645 CALML3P27482 149 aa8.87□□□□□ -0.99
SP140-202ENST00000373645 WDR5P61964 334 aaKnown RBP8.87□□□□□ -0.99
SP140-202ENST00000373645 HMGN5P82970 282 aaKnown RBP8.87□□□□□ -0.99
SP140-202ENST00000373645 TMTC3Q6ZXV5 915 aa8.87□□□□□ -0.99
SP140-202ENST00000373645 CCDC82Q8N4S0 544 aa8.87□□□□□ -0.99
SP140-202ENST00000373645 CLEC4DQ8WXI8 215 aa8.87□□□□□ -0.99
SP140-202ENST00000373645 RANBP17Q9H2T7 1088 aaKnown RBP8.87□□□□□ -0.99
SP140-202ENST00000373645 GPCPD1Q9NPB8 672 aa8.87□□□□□ -0.99
SP140-202ENST00000373645 POLR3EQ9NVU0 708 aa8.87□□□□□ -0.99
SP140-202ENST00000373645 COG5Q9UP83 839 aa8.87□□□□□ -0.99
SP140-202ENST00000373645 RBM47A0AV96 593 aaKnown RBP8.86□□□□□ -0.99
SP140-202ENST00000373645 PRPF3O43395 683 aaKnown RBP8.86□□□□□ -0.99
SP140-202ENST00000373645 PLA2G6O60733 806 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 GPR37L1O60883 481 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 NBNO60934 754 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 PLEKHA8P1O95397 391 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 SUPT20HL2P0C7V6 817 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 FDX1P10109 184 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 ACTN1P12814 892 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 IL9P15248 144 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 EDNRBP24530 442 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 GJB2P29033 226 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 CPT1AP50416 773 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 AKAP17AQ02040 695 aaKnown RBP8.86□□□□□ -0.99
SP140-202ENST00000373645 FUT2Q10981 343 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 GDF6Q6KF10 455 aaPredicted RBP8.86□□□□□ -0.99
SP140-202ENST00000373645 FAM117BQ6P1L5 589 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 NFRKBQ6P4R8 1299 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 BTNL9Q6UXG8 535 aa8.86□□□□□ -0.99
SP140-202ENST00000373645 ALYREFQ86V81 257 aaKnown RBP8.86□□□□□ -0.99
SP140-202ENST00000373645 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms