RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 HSD17B3P37058 310 aa15.05■□□□□ -0
USP49-201ENST00000373006 MEI1Q5TIA1 1274 aa15.05■□□□□ -0
USP49-201ENST00000373006 KCNK18Q7Z418 384 aa15.05■□□□□ -0
USP49-201ENST00000373006 DAGLBQ8NCG7 672 aa15.05■□□□□ -0
USP49-201ENST00000373006 WHAMMQ8TF30 809 aa15.05■□□□□ -0
USP49-201ENST00000373006 DDX12PQ92771 950 aa15.05■□□□□ -0
USP49-201ENST00000373006 CELF1Q92879 486 aaKnown RBP15.05■□□□□ -0
USP49-201ENST00000373006 CYFIP2Q96F07 1278 aa15.05■□□□□ -0
USP49-201ENST00000373006 INPP4AQ96PE3 977 aaPredicted RBP15.05■□□□□ -0
USP49-201ENST00000373006 PNMA5Q96PV4 448 aa15.05■□□□□ -0
USP49-201ENST00000373006 CCDC87Q9NVE4 849 aa15.05■□□□□ -0
USP49-201ENST00000373006 RNF14Q9UBS8 474 aa15.05■□□□□ -0
USP49-201ENST00000373006 BCL9O00512 1426 aa15.05■□□□□ -0
USP49-201ENST00000373006 HMGB1P1B2RPK0 211 aaPredicted RBP15.05■□□□□ -0
USP49-201ENST00000373006 CAMTA2O94983 1202 aa15.05■□□□□ -0
USP49-201ENST00000373006 GNAQP50148 359 aa15.05■□□□□ -0
USP49-201ENST00000373006 ERFEQ4G0M1 354 aa15.05■□□□□ -0
USP49-201ENST00000373006 USP17L2Q6R6M4 530 aa15.05■□□□□ -0
USP49-201ENST00000373006 CD302Q8IX05 232 aa15.05■□□□□ -0
USP49-201ENST00000373006 GUF1Q8N442 669 aaKnown RBP15.05■□□□□ -0
USP49-201ENST00000373006 MREGQ8N565 214 aa15.05■□□□□ -0
USP49-201ENST00000373006 USP38Q8NB14 1042 aa15.05■□□□□ -0
USP49-201ENST00000373006 ZKSCAN4Q969J2 545 aaPredicted RBP15.05■□□□□ -0
USP49-201ENST00000373006 GJA10Q969M2 543 aa15.05■□□□□ -0
USP49-201ENST00000373006 CCDC114Q96M63 670 aa15.05■□□□□ -0
USP49-201ENST00000373006 TMEM47Q9BQJ4 181 aa15.05■□□□□ -0
USP49-201ENST00000373006 VCPKMTQ9H867 229 aa15.05■□□□□ -0
USP49-201ENST00000373006 TMBIM4Q9HC24 238 aa15.05■□□□□ -0
USP49-201ENST00000373006 FAM170AA1A519 330 aa15.04■□□□□ -0
USP49-201ENST00000373006 GCOM1H8Y6P7 765 aaPredicted RBP15.04■□□□□ -0
USP49-201ENST00000373006 FGFR1OPO95684 399 aaKnown RBP15.04■□□□□ -0
USP49-201ENST00000373006 SERPING1P05155 500 aa15.04■□□□□ -0
USP49-201ENST00000373006 MYZAPP0CAP1 466 aa15.04■□□□□ -0
USP49-201ENST00000373006 CTNNA1P35221 906 aaKnown RBP15.04■□□□□ -0
USP49-201ENST00000373006 QPCTQ16769 361 aa15.04■□□□□ -0
USP49-201ENST00000373006 NELFCDQ8IXH7 590 aa15.04■□□□□ -0
USP49-201ENST00000373006 ZMYND12Q9H0C1 365 aa15.04■□□□□ -0
USP49-201ENST00000373006 TAF1DQ9H5J8 278 aaPredicted RBP15.04■□□□□ -0
USP49-201ENST00000373006 SHANK3Q9BYB0 1731 aa15.04■□□□□ -0
USP49-201ENST00000373006 GRID2IPA4D2P6 1211 aa15.04■□□□□ -0
USP49-201ENST00000373006 CEP104O60308 925 aa15.04■□□□□ -0
USP49-201ENST00000373006 FLT3P36888 993 aa15.04■□□□□ -0
USP49-201ENST00000373006 KRT25Q7Z3Z0 450 aa15.04■□□□□ -0
USP49-201ENST00000373006 NEUROG2Q9H2A3 272 aa15.04■□□□□ -0
USP49-201ENST00000373006 EIF4E1BA6NMX2 242 aaKnown RBP15.04■□□□□ -0
USP49-201ENST00000373006 PARP10Q53GL7 1025 aa15.04■□□□□ -0
USP49-201ENST00000373006 GALNT17Q6IS24 598 aa15.04■□□□□ -0
USP49-201ENST00000373006 CCDC121Q6ZUS5 278 aa15.04■□□□□ -0
USP49-201ENST00000373006 YTHDF3Q7Z739 585 aaKnown RBP15.04■□□□□ -0
USP49-201ENST00000373006 HOMEZQ8IX15 550 aa15.04■□□□□ -0
USP49-201ENST00000373006 ZNF444Q8N0Y2 327 aaPredicted RBP15.04■□□□□ -0
USP49-201ENST00000373006 UBLCP1Q8WVY7 318 aaPredicted RBP15.04■□□□□ -0
USP49-201ENST00000373006 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
USP49-201ENST00000373006 TAF4BQ92750 862 aa15.04■□□□□ -0
USP49-201ENST00000373006 SLC40A1Q9NP59 571 aa15.04■□□□□ -0
USP49-201ENST00000373006 DDX20Q9UHI6 824 aaKnown RBP15.04■□□□□ -0
USP49-201ENST00000373006 ATP6V0A2Q9Y487 856 aa15.04■□□□□ -0
USP49-201ENST00000373006 ATXN2Q99700 1313 aaKnown RBP15.03■□□□□ -0
USP49-201ENST00000373006 GOLGA6L7A0A1B0GV03 622 aa15.03■□□□□ -0
USP49-201ENST00000373006 HSPA9P38646 679 aaKnown RBP15.03■□□□□ -0
USP49-201ENST00000373006 TNNC1P63316 161 aa15.03■□□□□ -0
USP49-201ENST00000373006 LRRC63Q05C16 580 aa15.03■□□□□ -0
USP49-201ENST00000373006 KLHL30Q0D2K2 578 aa15.03■□□□□ -0
USP49-201ENST00000373006 NAA25Q14CX7 972 aa15.03■□□□□ -0
USP49-201ENST00000373006 UAP1Q16222 522 aaPredicted RBP15.03■□□□□ -0
USP49-201ENST00000373006 SBK1Q52WX2 424 aa15.03■□□□□ -0
USP49-201ENST00000373006 C12orf60Q5U649 245 aa15.03■□□□□ -0
USP49-201ENST00000373006 FGFBP2Q9BYJ0 223 aa15.03■□□□□ -0
USP49-201ENST00000373006 UBA5Q9GZZ9 404 aa15.03■□□□□ -0
USP49-201ENST00000373006 SAP30BPQ9UHR5 308 aaKnown RBP15.03■□□□□ -0
USP49-201ENST00000373006 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.03■□□□□ -0
USP49-201ENST00000373006 GMNCA6NCL1 334 aa15.03■□□□□ -0
USP49-201ENST00000373006 DCDC2CA8MYV0 355 aa15.03■□□□□ -0
USP49-201ENST00000373006 RBAK-RBAKDNI3L0D1 243 aa15.03■□□□□ -0
USP49-201ENST00000373006 SLC37A4O43826 429 aa15.03■□□□□ -0
USP49-201ENST00000373006 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
USP49-201ENST00000373006 DDR1Q08345 913 aa15.03■□□□□ -0
USP49-201ENST00000373006 SLC18A3Q16572 532 aa15.03■□□□□ -0
USP49-201ENST00000373006 EMC10Q5UCC4 262 aa15.03■□□□□ -0
USP49-201ENST00000373006 FAM43BQ6ZT52 329 aaPredicted RBP15.03■□□□□ -0
USP49-201ENST00000373006 TSG101Q99816 390 aa15.03■□□□□ -0
USP49-201ENST00000373006 DDX47Q9H0S4 455 aaKnown RBP15.03■□□□□ -0
USP49-201ENST00000373006 C6orf50Q9HD87 102 aa15.03■□□□□ -0
USP49-201ENST00000373006 CEP72Q9P209 647 aa15.03■□□□□ -0
USP49-201ENST00000373006 COL4A3BPQ9Y5P4 624 aa15.03■□□□□ -0
USP49-201ENST00000373006 PALM3A6NDB9 673 aaPredicted RBP15.02■□□□□ -0
USP49-201ENST00000373006 DNM1LO00429 736 aa15.02■□□□□ -0
USP49-201ENST00000373006 TDP2O95551 362 aa15.02■□□□□ -0
USP49-201ENST00000373006 ECHS1P30084 290 aa15.02■□□□□ -0
USP49-201ENST00000373006 CDR1P51861 262 aa15.02■□□□□ -0
USP49-201ENST00000373006 SMTNP53814 917 aa15.02■□□□□ -0
USP49-201ENST00000373006 RPS6KA1Q15418 735 aa15.02■□□□□ -0
USP49-201ENST00000373006 CALCRLQ16602 461 aa15.02■□□□□ -0
USP49-201ENST00000373006 SOGA3Q5TF21 947 aa15.02■□□□□ -0
USP49-201ENST00000373006 TXNRD3Q86VQ6 643 aa15.02■□□□□ -0
USP49-201ENST00000373006 SNX29Q8TEQ0 813 aa15.02■□□□□ -0
USP49-201ENST00000373006 ANKS1AQ92625 1134 aa15.02■□□□□ -0
USP49-201ENST00000373006 BSDC1Q9NW68 430 aaPredicted RBP15.02■□□□□ -0
USP49-201ENST00000373006 PCDHGC5Q9Y5F6 944 aa15.02■□□□□ -0
USP49-201ENST00000373006 ANKRD36CQ5JPF3 1778 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms