RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.21□□□□□ -0.45
SYNPO2L-201ENST00000372873 MAPK13O15264 365 aa12.21□□□□□ -0.46
SYNPO2L-201ENST00000372873 PRDM1O75626 825 aa12.21□□□□□ -0.46
SYNPO2L-201ENST00000372873 AMPD2Q01433 879 aa12.21□□□□□ -0.46
SYNPO2L-201ENST00000372873 SEL1L2Q5TEA6 688 aa12.21□□□□□ -0.46
SYNPO2L-201ENST00000372873 DYMQ7RTS9 669 aa12.21□□□□□ -0.46
SYNPO2L-201ENST00000372873 APBB1IPQ7Z5R6 666 aaPredicted RBP12.21□□□□□ -0.46
SYNPO2L-201ENST00000372873 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.46
SYNPO2L-201ENST00000372873 CASKIN2Q8WXE0 1202 aa12.21□□□□□ -0.46
SYNPO2L-201ENST00000372873 MIS12Q9H081 205 aa12.21□□□□□ -0.46
SYNPO2L-201ENST00000372873 SLC4A7Q9Y6M7 1214 aa12.21□□□□□ -0.46
SYNPO2L-201ENST00000372873 SART1O43290 800 aaKnown RBP12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 ATP5HO75947 161 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 UBTFL6P0CB48 400 aaPredicted RBP12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 GRIN1Q05586 938 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 PBKQ96KB5 322 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 LSM14BQ9BX40 385 aaKnown RBP12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 SNX24Q9Y343 169 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 ORC4O43929 436 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 CTDSPL2Q05D32 466 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 GCKRQ14397 625 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 PPP2R5EQ16537 467 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 MAB21L3Q8N8X9 362 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 CCDC87Q9NVE4 849 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 USP42Q9H9J4 1324 aaKnown RBP12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 ABCB4P21439 1286 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 SERPINB3P29508 390 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 RFC1P35251 1148 aaPredicted RBP12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 ERFP50548 548 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 HERVK_113P62684 666 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 ARL10Q8N8L6 244 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 ZNF579Q8NAF0 562 aaKnown RBP12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 RUNDC3BQ96NL0 473 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 THAP9Q9H5L6 903 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 SH2D4AQ9H788 454 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 BABAM1Q9NWV8 329 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 IKBKGQ9Y6K9 419 aa12.2□□□□□ -0.46
SYNPO2L-201ENST00000372873 A0A1W2PQC6 194 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 HOXB7P09629 217 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 FAM200BP0CF97 657 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 ZCCHC18P0CG32 403 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 CALML3P27482 149 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 CETN2P41208 172 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 KCNJ2P63252 427 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 INF2Q27J81 1249 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 SLC44A4Q53GD3 710 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 TMC4Q7Z404 712 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 ARHGAP42A6NI28 874 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 CCDC188H7C350 402 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 ZNF189O75820 626 aaPredicted RBP12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 SNRPA1P09661 255 aaKnown RBP12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 VPS41P49754 854 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 DCAF17Q5H9S7 520 aaPredicted RBP12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 SV2BQ7L1I2 683 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 GSTA5Q7RTV2 222 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 ARHGEF28Q8N1W1 1705 aaKnown RBP12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 P2RX5Q93086 422 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 OSBP2Q969R2 916 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 ZNF594Q96JF6 807 aaPredicted RBP12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 RPS6KC1Q96S38 1066 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 CUEDC2Q9H467 287 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 HOMER2Q9NSB8 354 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 COL3A1P02461 1466 aaPredicted RBP12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 RAB27AP51159 221 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 ITGB3BPQ13352 177 aaPredicted RBP12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 QPCTQ16769 361 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 TTLL7Q6ZT98 887 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 PPP1R14CQ8TAE6 165 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 NLRP3Q96P20 1036 aa12.19□□□□□ -0.46
SYNPO2L-201ENST00000372873 LRRC53A6NM62 1247 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 THAP12O43422 761 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 H2AFZP0C0S5 128 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 ITIH3Q06033 890 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 ITIH4Q14624 930 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 H2AFVQ71UI9 128 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 DDX12PQ92771 950 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 BICD1Q96G01 975 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 SYNCQ9H7C4 482 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 FBXO2Q9UK22 296 aaPredicted RBP12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 PTPN22Q9Y2R2 807 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 ATP6V0A2Q9Y487 856 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 NEURL4Q96JN8 1562 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 M0R2C6 588 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 TPD52L2O43399 206 aaKnown RBP12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 ACSL3O95573 720 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 FESP07332 822 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 GSTA2P09210 222 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 ZAP70P43403 619 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 PMS2P54278 862 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 SPICE1Q8N0Z3 855 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 STAG2Q8N3U4 1231 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 TATDN2Q93075 761 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 TGS1Q96RS0 853 aaKnown RBP12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 MMADHCQ9H3L0 296 aaPredicted RBP12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 GRID2IPA4D2P6 1211 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 GYG2O15488 501 aa12.18□□□□□ -0.46
SYNPO2L-201ENST00000372873 EEF2P13639 858 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms