RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 H7C1W4 665 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 SHC4Q6S5L8 630 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 MIS12Q9H081 205 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 SEC31BQ9NQW1 1179 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 TRPM1Q7Z4N2 1603 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 GMNCA6NCL1 334 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 IGKV5-2P06315 115 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 ATP2B4P23634 1241 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 TSGA10IPQ3SY00 556 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 ZNF449Q6P9G9 518 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 SRLQ86TD4 932 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 MED14O60244 1454 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 SH3BP5O60239 455 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 PFDN1O60925 122 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 RASGRF1Q13972 1273 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 TRIM50Q86XT4 487 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 DPF2Q92785 391 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 AFG3L2Q9Y4W6 797 aa18.55■□□□□ 0.56
PTP4A1-201ENST00000370651 TNNC2P02585 160 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 TMOD1P28289 359 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 PIK3CAP42336 1068 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 MCAMP43121 646 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 COA7Q96BR5 231 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 UBE2TQ9NPD8 197 aaPredicted RBP18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 CEP72Q9P209 647 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 LRRC53A6NM62 1247 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 CTIFO43310 598 aaKnown RBP18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 ACSL3O95573 720 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 CA4P22748 312 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 POLE2P56282 527 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 PDE1BQ01064 536 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 MTF1Q14872 753 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 ALAS1P13196 640 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 DIXDC1Q155Q3 683 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 GNPTABQ3T906 1256 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 NFRKBQ6P4R8 1299 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 UNC13DQ70J99 1090 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 CYB5R4Q7L1T6 521 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 NLRP7Q8WX94 980 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 YEATS2Q9ULM3 1422 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 MEIS1O00470 390 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 PODXLO00592 558 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 HNRNPDLO14979 420 aaKnown RBP18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 MAPK13O15264 365 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 MT-ND3P03897 115 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 YARSP54577 528 aaKnown RBP18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 ASPHQ12797 758 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 TRIP13Q15645 432 aaPredicted RBP18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 MAP7D3Q8IWC1 876 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 THEGQ9P2T0 379 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 SNX24Q9Y343 169 aa18.54■□□□□ 0.56
PTP4A1-201ENST00000370651 MAP3K7O43318 606 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 GARSP41250 739 aaKnown RBP18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 NLRP10Q86W26 655 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 ZBTB1Q9Y2K1 713 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 ESYT3A0FGR9 886 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 IL6STP40189 918 aaPredicted RBP18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 RINT1Q6NUQ1 792 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 RHOT2Q8IXI1 618 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 SCYL1Q96KG9 808 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 CCDC17Q96LX7 622 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 PCDHB4Q9Y5E5 795 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 MAGOHP61326 146 aaKnown RBP18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 USP17L2Q6R6M4 530 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 NLRP14Q86W24 1093 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 ZBTB8OSQ8IWT0 167 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 ACCSQ96QU6 501 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 ASAP1Q9ULH1 1129 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 TARSL2A2RTX5 802 aaKnown RBP18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 TTLL1O95922 423 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 ARHGEF16Q5VV41 709 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 OXER1Q8TDS5 423 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 GLG1Q92896 1179 aa18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 DIS3Q9Y2L1 958 aaKnown RBP18.53■□□□□ 0.56
PTP4A1-201ENST00000370651 TMEM191BP0C7N4 346 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 ZSCAN20P17040 1043 aaPredicted RBP18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 HVCN1Q96D96 273 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 PITPNM3Q9BZ71 974 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 KIF1BO60333 1816 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 PPP2R2AP63151 447 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 RFX6Q8HWS3 928 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 IRX2Q9BZI1 471 aaPredicted RBP18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 IFT122Q9HBG6 1241 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 SH3GLB2Q9NR46 395 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 NEDD4P46934 1319 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 FOXN1O15353 648 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 ESRRAP11474 423 aaPredicted RBP18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 SCNN1DP51172 638 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 BEND6Q5SZJ8 279 aaPredicted RBP18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 SLC17A8Q8NDX2 589 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 NSMCE1Q8WV22 266 aa18.52■□□□□ 0.56
PTP4A1-201ENST00000370651 ATP1A1P05023 1023 aaKnown RBP18.52■□□□□ 0.55
PTP4A1-201ENST00000370651 NACC1Q96RE7 527 aa18.52■□□□□ 0.55
PTP4A1-201ENST00000370651 PCIF1Q9H4Z3 704 aa18.52■□□□□ 0.55
PTP4A1-201ENST00000370651 MRPL47Q9HD33 250 aaKnown RBP18.52■□□□□ 0.55
PTP4A1-201ENST00000370651 MXI1P50539 228 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 GFPT1Q06210 699 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms