RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 IGLV3-22A0A075B6J6 115 aa16.85■□□□□ 0.29
COL9A1-204ENST00000370496 BTBD18B2RXH4 712 aa16.85■□□□□ 0.29
COL9A1-204ENST00000370496 MEIS1O00470 390 aa16.85■□□□□ 0.29
COL9A1-204ENST00000370496 KPNA6O60684 536 aa16.85■□□□□ 0.29
COL9A1-204ENST00000370496 USP11P51784 963 aa16.85■□□□□ 0.29
COL9A1-204ENST00000370496 PURAQ00577 322 aaKnown RBP16.85■□□□□ 0.29
COL9A1-204ENST00000370496 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
COL9A1-204ENST00000370496 NEK8Q86SG6 692 aa16.85■□□□□ 0.29
COL9A1-204ENST00000370496 DPF3Q92784 378 aa16.85■□□□□ 0.29
COL9A1-204ENST00000370496 MTG1Q9BT17 334 aaPredicted RBP16.85■□□□□ 0.29
COL9A1-204ENST00000370496 AGO4Q9HCK5 861 aaKnown RBP16.85■□□□□ 0.29
COL9A1-204ENST00000370496 JPH1Q9HDC5 661 aaPredicted RBP16.85■□□□□ 0.29
COL9A1-204ENST00000370496 TCEAL9Q9UHQ7 104 aa16.85■□□□□ 0.29
COL9A1-204ENST00000370496 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
COL9A1-204ENST00000370496 FAM205CA6NFA0 338 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 H3BQV1 296 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 ATP9AO75110 1047 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 TDP2O95551 362 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 HSP90AA1P07900 732 aaKnown RBP16.84■□□□□ 0.29
COL9A1-204ENST00000370496 ZNF286BP0CG31 522 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 ARP10275 920 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 CIITAP33076 1130 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 LRRC26Q2I0M4 334 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 HSDL1Q3SXM5 330 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 TNFRSF25Q93038 417 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 NAP1L4Q99733 375 aaKnown RBP16.84■□□□□ 0.29
COL9A1-204ENST00000370496 ZNF577Q9BSK1 485 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 ATP11BQ9Y2G3 1177 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 ELP1O95163 1332 aa16.84■□□□□ 0.29
COL9A1-204ENST00000370496 SCN10AQ9Y5Y9 1956 aa16.83■□□□□ 0.29
COL9A1-204ENST00000370496 DDX39AO00148 427 aaKnown RBP16.83■□□□□ 0.28
COL9A1-204ENST00000370496 IPO5O00410 1097 aaKnown RBP16.83■□□□□ 0.28
COL9A1-204ENST00000370496 EVI5O60447 810 aa16.83■□□□□ 0.28
COL9A1-204ENST00000370496 RTP1P59025 263 aa16.83■□□□□ 0.28
COL9A1-204ENST00000370496 CHMP4BP1P59074 171 aa16.83■□□□□ 0.28
COL9A1-204ENST00000370496 EARS2Q5JPH6 523 aaKnown RBP16.83■□□□□ 0.28
COL9A1-204ENST00000370496 SLC39A5Q6ZMH5 540 aa16.83■□□□□ 0.28
COL9A1-204ENST00000370496 C7orf61Q8IZ16 206 aa16.83■□□□□ 0.28
COL9A1-204ENST00000370496 FOXP1Q9H334 677 aaPredicted RBP16.83■□□□□ 0.28
COL9A1-204ENST00000370496 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
COL9A1-204ENST00000370496 DDX25Q9UHL0 483 aaKnown RBP16.83■□□□□ 0.28
COL9A1-204ENST00000370496 NFASCO94856 1347 aa16.83■□□□□ 0.28
COL9A1-204ENST00000370496 CCNT1O60563 726 aaKnown RBP16.82■□□□□ 0.28
COL9A1-204ENST00000370496 GCFC2P16383 781 aaKnown RBP16.82■□□□□ 0.28
COL9A1-204ENST00000370496 PSMC6P62333 389 aa16.82■□□□□ 0.28
COL9A1-204ENST00000370496 ITGB3BPQ13352 177 aaPredicted RBP16.82■□□□□ 0.28
COL9A1-204ENST00000370496 TRIM60Q495X7 471 aa16.82■□□□□ 0.28
COL9A1-204ENST00000370496 MOXD1Q6UVY6 613 aa16.82■□□□□ 0.28
COL9A1-204ENST00000370496 LENG9Q96B70 501 aa16.82■□□□□ 0.28
COL9A1-204ENST00000370496 UIMC1Q96RL1 719 aa16.82■□□□□ 0.28
COL9A1-204ENST00000370496 KATNAL1Q9BW62 490 aa16.82■□□□□ 0.28
COL9A1-204ENST00000370496 BCAS3Q9H6U6 928 aa16.82■□□□□ 0.28
COL9A1-204ENST00000370496 SLC9A2Q9UBY0 812 aa16.82■□□□□ 0.28
COL9A1-204ENST00000370496 MROH7Q68CQ1 1323 aa16.82■□□□□ 0.28
COL9A1-204ENST00000370496 TNRC18O15417 2968 aaPredicted RBP16.81■□□□□ 0.28
COL9A1-204ENST00000370496 PQBP1O60828 265 aaKnown RBP16.81■□□□□ 0.28
COL9A1-204ENST00000370496 HOXD8P13378 290 aaPredicted RBP16.81■□□□□ 0.28
COL9A1-204ENST00000370496 SNX17Q15036 470 aa16.81■□□□□ 0.28
COL9A1-204ENST00000370496 Q4G0T1 1027 aa16.81■□□□□ 0.28
COL9A1-204ENST00000370496 LARP1BQ659C4 914 aaKnown RBP16.81■□□□□ 0.28
COL9A1-204ENST00000370496 MCTP1Q6DN14 999 aa16.81■□□□□ 0.28
COL9A1-204ENST00000370496 INTS4Q96HW7 963 aaKnown RBP16.81■□□□□ 0.28
COL9A1-204ENST00000370496 GPR20Q99678 358 aa16.81■□□□□ 0.28
COL9A1-204ENST00000370496 CYP3A7-CYP3A51PA0A087WV96 503 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 SLC37A4O43826 429 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 PPFIA4O75335 1185 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 F2P00734 622 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 LGALS2P05162 132 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 PDCP20941 246 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 CYP3A7P24462 503 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 TCF7P36402 384 aaPredicted RBP16.8■□□□□ 0.28
COL9A1-204ENST00000370496 ITGA7Q13683 1181 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 FAM47CQ5HY64 1035 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 UTP14CQ5TAP6 766 aaKnown RBP16.8■□□□□ 0.28
COL9A1-204ENST00000370496 NOSTRINQ8IVI9 506 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 TBC1D22BQ9NU19 505 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 ZNF215Q9UL58 517 aaPredicted RBP16.8■□□□□ 0.28
COL9A1-204ENST00000370496 NOL7Q9UMY1 257 aaKnown RBP16.8■□□□□ 0.28
COL9A1-204ENST00000370496 NR2E3Q9Y5X4 410 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 DNAH12Q6ZR08 3092 aa16.8■□□□□ 0.28
COL9A1-204ENST00000370496 VPS37CA5D8V6 355 aaPredicted RBP16.79■□□□□ 0.28
COL9A1-204ENST00000370496 KIF28PB7ZC32 967 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 ARVCFO00192 962 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 MSH4O15457 936 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 EDIL3O43854 480 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 GAS7O60861 476 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 ACTR2P61160 394 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 MFSD10Q14728 455 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 C1orf53Q5VUE5 145 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 LRCH2Q5VUJ6 765 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 PPP4R3AQ6IN85 833 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 TRIM50Q86XT4 487 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 MBOAT7Q96N66 472 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 TELO2Q9Y4R8 837 aa16.79■□□□□ 0.28
COL9A1-204ENST00000370496 TLR3O15455 904 aaKnown RBP16.78■□□□□ 0.28
COL9A1-204ENST00000370496 MARCH6O60337 910 aa16.78■□□□□ 0.28
COL9A1-204ENST00000370496 ATP2B1P20020 1258 aa16.78■□□□□ 0.28
COL9A1-204ENST00000370496 PSEN2P49810 448 aa16.78■□□□□ 0.28
COL9A1-204ENST00000370496 KRT76Q01546 638 aa16.78■□□□□ 0.28
COL9A1-204ENST00000370496 NBPF20Q3BBV1 942 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms